Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRTM4Q86VH4 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRRTM4Q86VH4 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRRTM4Q86VH4 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRTM4Q86VH4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRTM4Q86VH4 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.14■□□□□ 0.33
LRRTM4Q86VH4 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRTM4Q86VH4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRTM4Q86VH4 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LRRTM4Q86VH4 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
LRRTM4Q86VH4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRRTM4Q86VH4 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.14■□□□□ 0.33
LRRTM4Q86VH4 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.14■□□□□ 0.33
LRRTM4Q86VH4 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRTM4Q86VH4 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRTM4Q86VH4 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.14■□□□□ 0.33
LRRTM4Q86VH4 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.14■□□□□ 0.33
LRRTM4Q86VH4 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.14■□□□□ 0.33
LRRTM4Q86VH4 AL589182.2-201ENST00000619332 1049 ntBASIC17.14■□□□□ 0.33
LRRTM4Q86VH4 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRTM4Q86VH4 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.14■□□□□ 0.33
LRRTM4Q86VH4 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.14■□□□□ 0.33
LRRTM4Q86VH4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRTM4Q86VH4 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRTM4Q86VH4 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRTM4Q86VH4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRTM4Q86VH4 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.13■□□□□ 0.33
LRRTM4Q86VH4 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRRTM4Q86VH4 NCF1C-201ENST00000438382 1427 ntBASIC17.13■□□□□ 0.33
LRRTM4Q86VH4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.13■□□□□ 0.33
LRRTM4Q86VH4 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.13■□□□□ 0.33
LRRTM4Q86VH4 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRRTM4Q86VH4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
LRRTM4Q86VH4 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.13■□□□□ 0.33
LRRTM4Q86VH4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRTM4Q86VH4 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
LRRTM4Q86VH4 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
LRRTM4Q86VH4 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRTM4Q86VH4 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
LRRTM4Q86VH4 LYSMD4-203ENST00000378904 2122 ntBASIC17.13■□□□□ 0.33
LRRTM4Q86VH4 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRRTM4Q86VH4 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.13■□□□□ 0.33
LRRTM4Q86VH4 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRTM4Q86VH4 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.13■□□□□ 0.33
LRRTM4Q86VH4 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.13■□□□□ 0.33
LRRTM4Q86VH4 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
LRRTM4Q86VH4 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.13■□□□□ 0.33
LRRTM4Q86VH4 AC139887.3-201ENST00000568585 713 ntBASIC17.13■□□□□ 0.33
LRRTM4Q86VH4 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.13■□□□□ 0.33
LRRTM4Q86VH4 MIR7706-201ENST00000613747 67 ntBASIC17.13■□□□□ 0.33
LRRTM4Q86VH4 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.13■□□□□ 0.33
LRRTM4Q86VH4 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.13■□□□□ 0.33
LRRTM4Q86VH4 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRRTM4Q86VH4 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRRTM4Q86VH4 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.13■□□□□ 0.33
LRRTM4Q86VH4 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.13■□□□□ 0.33
LRRTM4Q86VH4 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
LRRTM4Q86VH4 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRTM4Q86VH4 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRTM4Q86VH4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRTM4Q86VH4 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.12■□□□□ 0.33
LRRTM4Q86VH4 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LRRTM4Q86VH4 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.12■□□□□ 0.33
LRRTM4Q86VH4 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRTM4Q86VH4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRRTM4Q86VH4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.12■□□□□ 0.33
LRRTM4Q86VH4 AC068880.1-201ENST00000507289 2297 ntBASIC17.12■□□□□ 0.33
LRRTM4Q86VH4 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRTM4Q86VH4 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRTM4Q86VH4 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.12■□□□□ 0.33
LRRTM4Q86VH4 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.12■□□□□ 0.33
LRRTM4Q86VH4 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRTM4Q86VH4 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.12■□□□□ 0.33
LRRTM4Q86VH4 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
LRRTM4Q86VH4 AC006557.2-201ENST00000592985 1240 ntBASIC17.12■□□□□ 0.33
LRRTM4Q86VH4 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
LRRTM4Q86VH4 AC008735.5-201ENST00000623544 497 ntBASIC17.12■□□□□ 0.33
LRRTM4Q86VH4 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.12■□□□□ 0.33
LRRTM4Q86VH4 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRRTM4Q86VH4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRTM4Q86VH4 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRTM4Q86VH4 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRRTM4Q86VH4 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRTM4Q86VH4 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRTM4Q86VH4 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRTM4Q86VH4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRTM4Q86VH4 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.11■□□□□ 0.33
LRRTM4Q86VH4 AC097637.2-201ENST00000624096 1997 ntBASIC17.11■□□□□ 0.33
LRRTM4Q86VH4 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRTM4Q86VH4 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRTM4Q86VH4 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRTM4Q86VH4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.11■□□□□ 0.33
LRRTM4Q86VH4 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRTM4Q86VH4 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRRTM4Q86VH4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRTM4Q86VH4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRTM4Q86VH4 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRRTM4Q86VH4 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRTM4Q86VH4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRTM4Q86VH4 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms