Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C11orf88Q6PI97 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
C11orf88Q6PI97 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
C11orf88Q6PI97 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
C11orf88Q6PI97 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
C11orf88Q6PI97 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
C11orf88Q6PI97 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
C11orf88Q6PI97 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
C11orf88Q6PI97 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C11orf88Q6PI97 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
C11orf88Q6PI97 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
C11orf88Q6PI97 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C11orf88Q6PI97 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC15.29■□□□□ 0.04
C11orf88Q6PI97 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC15.29■□□□□ 0.04
C11orf88Q6PI97 KRT8P41-201ENST00000533985 1514 ntBASIC15.29■□□□□ 0.04
C11orf88Q6PI97 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C11orf88Q6PI97 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
C11orf88Q6PI97 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
C11orf88Q6PI97 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC15.29■□□□□ 0.04
C11orf88Q6PI97 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
C11orf88Q6PI97 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
C11orf88Q6PI97 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
C11orf88Q6PI97 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C11orf88Q6PI97 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C11orf88Q6PI97 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.29■□□□□ 0.04
C11orf88Q6PI97 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
C11orf88Q6PI97 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.29■□□□□ 0.04
C11orf88Q6PI97 FAM207BP-201ENST00000447172 505 ntBASIC15.29■□□□□ 0.04
C11orf88Q6PI97 AC091390.4-202ENST00000476426 537 ntBASIC15.29■□□□□ 0.04
C11orf88Q6PI97 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC15.29■□□□□ 0.04
C11orf88Q6PI97 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.29■□□□□ 0.04
C11orf88Q6PI97 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
C11orf88Q6PI97 AC116562.4-202ENST00000641738 218 ntBASIC15.29■□□□□ 0.04
C11orf88Q6PI97 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C11orf88Q6PI97 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
C11orf88Q6PI97 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C11orf88Q6PI97 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.29■□□□□ 0.04
C11orf88Q6PI97 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.29■□□□□ 0.04
C11orf88Q6PI97 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C11orf88Q6PI97 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.29■□□□□ 0.04
C11orf88Q6PI97 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
C11orf88Q6PI97 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
C11orf88Q6PI97 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
C11orf88Q6PI97 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
C11orf88Q6PI97 AC068418.2-201ENST00000577309 3703 ntBASIC15.29■□□□□ 0.04
C11orf88Q6PI97 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
C11orf88Q6PI97 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C11orf88Q6PI97 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
C11orf88Q6PI97 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
C11orf88Q6PI97 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC15.28■□□□□ 0.04
C11orf88Q6PI97 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C11orf88Q6PI97 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
C11orf88Q6PI97 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
C11orf88Q6PI97 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
C11orf88Q6PI97 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
C11orf88Q6PI97 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C11orf88Q6PI97 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
C11orf88Q6PI97 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C11orf88Q6PI97 AC096733.2-201ENST00000609937 1394 ntBASIC15.28■□□□□ 0.04
C11orf88Q6PI97 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C11orf88Q6PI97 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
C11orf88Q6PI97 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
C11orf88Q6PI97 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C11orf88Q6PI97 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
C11orf88Q6PI97 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC15.28■□□□□ 0.04
C11orf88Q6PI97 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
C11orf88Q6PI97 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
C11orf88Q6PI97 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.28■□□□□ 0.04
C11orf88Q6PI97 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.28■□□□□ 0.04
C11orf88Q6PI97 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
C11orf88Q6PI97 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
C11orf88Q6PI97 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.28■□□□□ 0.04
C11orf88Q6PI97 SLC25A1P4-201ENST00000567977 778 ntBASIC15.28■□□□□ 0.04
C11orf88Q6PI97 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C11orf88Q6PI97 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.28■□□□□ 0.04
C11orf88Q6PI97 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C11orf88Q6PI97 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.28■□□□□ 0.04
C11orf88Q6PI97 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
C11orf88Q6PI97 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C11orf88Q6PI97 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
C11orf88Q6PI97 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C11orf88Q6PI97 AL161772.1-201ENST00000610494 4412 ntBASIC15.28■□□□□ 0.04
C11orf88Q6PI97 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
C11orf88Q6PI97 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C11orf88Q6PI97 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.27■□□□□ 0.04
C11orf88Q6PI97 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C11orf88Q6PI97 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
C11orf88Q6PI97 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.27■□□□□ 0.04
C11orf88Q6PI97 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
C11orf88Q6PI97 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
C11orf88Q6PI97 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C11orf88Q6PI97 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
C11orf88Q6PI97 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C11orf88Q6PI97 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C11orf88Q6PI97 ARMC10P1-201ENST00000313754 855 ntBASIC15.27■□□□□ 0.04
C11orf88Q6PI97 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C11orf88Q6PI97 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
C11orf88Q6PI97 HMGA1P5-201ENST00000412453 271 ntBASIC15.27■□□□□ 0.04
C11orf88Q6PI97 AC008040.2-201ENST00000461049 708 ntBASIC15.27■□□□□ 0.04
C11orf88Q6PI97 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms