Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RFWD3Q6PCD5 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFWD3Q6PCD5 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.24■□□□□ 0.51
RFWD3Q6PCD5 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFWD3Q6PCD5 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFWD3Q6PCD5 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFWD3Q6PCD5 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RFWD3Q6PCD5 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RFWD3Q6PCD5 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
RFWD3Q6PCD5 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.23■□□□□ 0.51
RFWD3Q6PCD5 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.23■□□□□ 0.51
RFWD3Q6PCD5 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.23■□□□□ 0.51
RFWD3Q6PCD5 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFWD3Q6PCD5 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RFWD3Q6PCD5 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RFWD3Q6PCD5 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RFWD3Q6PCD5 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RFWD3Q6PCD5 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.23■□□□□ 0.51
RFWD3Q6PCD5 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RFWD3Q6PCD5 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RFWD3Q6PCD5 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.23■□□□□ 0.51
RFWD3Q6PCD5 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RFWD3Q6PCD5 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
RFWD3Q6PCD5 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
RFWD3Q6PCD5 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.23■□□□□ 0.51
RFWD3Q6PCD5 SLC25A6P4-201ENST00000586535 553 ntBASIC18.23■□□□□ 0.51
RFWD3Q6PCD5 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.23■□□□□ 0.51
RFWD3Q6PCD5 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RFWD3Q6PCD5 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFWD3Q6PCD5 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFWD3Q6PCD5 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RFWD3Q6PCD5 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.23■□□□□ 0.51
RFWD3Q6PCD5 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RFWD3Q6PCD5 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.23■□□□□ 0.51
RFWD3Q6PCD5 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFWD3Q6PCD5 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RFWD3Q6PCD5 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFWD3Q6PCD5 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFWD3Q6PCD5 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFWD3Q6PCD5 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RFWD3Q6PCD5 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFWD3Q6PCD5 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RFWD3Q6PCD5 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RFWD3Q6PCD5 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFWD3Q6PCD5 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.22■□□□□ 0.51
RFWD3Q6PCD5 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFWD3Q6PCD5 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFWD3Q6PCD5 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.22■□□□□ 0.51
RFWD3Q6PCD5 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.22■□□□□ 0.51
RFWD3Q6PCD5 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RFWD3Q6PCD5 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.22■□□□□ 0.51
RFWD3Q6PCD5 DDX43P3-201ENST00000441064 443 ntBASIC18.22■□□□□ 0.51
RFWD3Q6PCD5 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.22■□□□□ 0.51
RFWD3Q6PCD5 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.22■□□□□ 0.51
RFWD3Q6PCD5 AC148477.8-201ENST00000624298 468 ntBASIC18.22■□□□□ 0.51
RFWD3Q6PCD5 AP000867.4-201ENST00000641616 219 ntBASIC18.22■□□□□ 0.51
RFWD3Q6PCD5 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RFWD3Q6PCD5 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFWD3Q6PCD5 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.22■□□□□ 0.51
RFWD3Q6PCD5 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFWD3Q6PCD5 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.22■□□□□ 0.51
RFWD3Q6PCD5 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFWD3Q6PCD5 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFWD3Q6PCD5 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFWD3Q6PCD5 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.21■□□□□ 0.51
RFWD3Q6PCD5 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.21■□□□□ 0.51
RFWD3Q6PCD5 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFWD3Q6PCD5 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFWD3Q6PCD5 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFWD3Q6PCD5 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
RFWD3Q6PCD5 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFWD3Q6PCD5 BCL2-203ENST00000589955 5011 ntBASIC18.21■□□□□ 0.51
RFWD3Q6PCD5 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.21■□□□□ 0.51
RFWD3Q6PCD5 SART3-203ENST00000546611 1184 ntBASIC18.21■□□□□ 0.51
RFWD3Q6PCD5 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.21■□□□□ 0.51
RFWD3Q6PCD5 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RFWD3Q6PCD5 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.21■□□□□ 0.51
RFWD3Q6PCD5 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.21■□□□□ 0.51
RFWD3Q6PCD5 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RFWD3Q6PCD5 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.21■□□□□ 0.51
RFWD3Q6PCD5 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.21■□□□□ 0.51
RFWD3Q6PCD5 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFWD3Q6PCD5 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.21■□□□□ 0.51
RFWD3Q6PCD5 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.21■□□□□ 0.51
RFWD3Q6PCD5 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.21■□□□□ 0.51
RFWD3Q6PCD5 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
RFWD3Q6PCD5 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.21■□□□□ 0.51
RFWD3Q6PCD5 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFWD3Q6PCD5 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFWD3Q6PCD5 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.2■□□□□ 0.5
RFWD3Q6PCD5 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFWD3Q6PCD5 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFWD3Q6PCD5 AC108860.2-201ENST00000562760 2183 ntBASIC18.2■□□□□ 0.5
RFWD3Q6PCD5 BX276092.7-203ENST00000637198 1536 ntBASIC18.2■□□□□ 0.5
RFWD3Q6PCD5 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.2■□□□□ 0.5
RFWD3Q6PCD5 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.2■□□□□ 0.5
RFWD3Q6PCD5 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFWD3Q6PCD5 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFWD3Q6PCD5 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RFWD3Q6PCD5 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms