Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.77■□□□□ 0.28
RIF1Q5UIP0 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RIF1Q5UIP0 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
RIF1Q5UIP0 LINC00982-205ENST00000420957 435 ntBASIC16.77■□□□□ 0.28
RIF1Q5UIP0 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.77■□□□□ 0.28
RIF1Q5UIP0 IGHV3-62-201ENST00000520057 340 ntBASIC16.77■□□□□ 0.28
RIF1Q5UIP0 AL512343.1-201ENST00000605837 169 ntBASIC16.77■□□□□ 0.28
RIF1Q5UIP0 AL161645.1-201ENST00000622716 1255 ntBASIC16.77■□□□□ 0.28
RIF1Q5UIP0 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RIF1Q5UIP0 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RIF1Q5UIP0 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
RIF1Q5UIP0 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RIF1Q5UIP0 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RIF1Q5UIP0 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RIF1Q5UIP0 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RIF1Q5UIP0 BTBD7P1-201ENST00000447253 1453 ntBASIC16.77■□□□□ 0.28
RIF1Q5UIP0 AC007541.1-201ENST00000570282 1469 ntBASIC16.77■□□□□ 0.28
RIF1Q5UIP0 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC16.77■□□□□ 0.28
RIF1Q5UIP0 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
RIF1Q5UIP0 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
RIF1Q5UIP0 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.27
RIF1Q5UIP0 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.77■□□□□ 0.27
RIF1Q5UIP0 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
RIF1Q5UIP0 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RIF1Q5UIP0 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RIF1Q5UIP0 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RIF1Q5UIP0 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.77■□□□□ 0.27
RIF1Q5UIP0 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.77■□□□□ 0.27
RIF1Q5UIP0 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RIF1Q5UIP0 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.77■□□□□ 0.27
RIF1Q5UIP0 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.77■□□□□ 0.27
RIF1Q5UIP0 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.77■□□□□ 0.27
RIF1Q5UIP0 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.77■□□□□ 0.27
RIF1Q5UIP0 AC008738.7-201ENST00000609744 511 ntBASIC16.77■□□□□ 0.27
RIF1Q5UIP0 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RIF1Q5UIP0 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RIF1Q5UIP0 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.77■□□□□ 0.27
RIF1Q5UIP0 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
RIF1Q5UIP0 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.77■□□□□ 0.27
RIF1Q5UIP0 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RIF1Q5UIP0 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RIF1Q5UIP0 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RIF1Q5UIP0 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.77■□□□□ 0.27
RIF1Q5UIP0 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.77■□□□□ 0.27
RIF1Q5UIP0 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.77■□□□□ 0.27
RIF1Q5UIP0 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RIF1Q5UIP0 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.77■□□□□ 0.27
RIF1Q5UIP0 AL590787.1-201ENST00000568856 1315 ntBASIC16.77■□□□□ 0.27
RIF1Q5UIP0 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RIF1Q5UIP0 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.76■□□□□ 0.27
RIF1Q5UIP0 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RIF1Q5UIP0 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.76■□□□□ 0.27
RIF1Q5UIP0 HMGA1P7-201ENST00000406908 502 ntBASIC16.76■□□□□ 0.27
RIF1Q5UIP0 AC087163.2-201ENST00000457299 853 ntBASIC16.76■□□□□ 0.27
RIF1Q5UIP0 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RIF1Q5UIP0 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.76■□□□□ 0.27
RIF1Q5UIP0 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.76■□□□□ 0.27
RIF1Q5UIP0 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.76■□□□□ 0.27
RIF1Q5UIP0 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.76■□□□□ 0.27
RIF1Q5UIP0 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RIF1Q5UIP0 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RIF1Q5UIP0 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RIF1Q5UIP0 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.76■□□□□ 0.27
RIF1Q5UIP0 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RIF1Q5UIP0 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RIF1Q5UIP0 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.76■□□□□ 0.27
RIF1Q5UIP0 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RIF1Q5UIP0 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RIF1Q5UIP0 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.76■□□□□ 0.27
RIF1Q5UIP0 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RIF1Q5UIP0 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RIF1Q5UIP0 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RIF1Q5UIP0 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RIF1Q5UIP0 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RIF1Q5UIP0 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.76■□□□□ 0.27
RIF1Q5UIP0 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.76■□□□□ 0.27
RIF1Q5UIP0 HLA-V-204ENST00000476601 1289 ntBASIC16.76■□□□□ 0.27
RIF1Q5UIP0 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RIF1Q5UIP0 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.76■□□□□ 0.27
RIF1Q5UIP0 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.76■□□□□ 0.27
RIF1Q5UIP0 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.76■□□□□ 0.27
RIF1Q5UIP0 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RIF1Q5UIP0 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RIF1Q5UIP0 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RIF1Q5UIP0 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.76■□□□□ 0.27
RIF1Q5UIP0 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.76■□□□□ 0.27
RIF1Q5UIP0 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RIF1Q5UIP0 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RIF1Q5UIP0 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.75■□□□□ 0.27
RIF1Q5UIP0 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.75■□□□□ 0.27
RIF1Q5UIP0 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.75■□□□□ 0.27
RIF1Q5UIP0 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RIF1Q5UIP0 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RIF1Q5UIP0 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC16.75■□□□□ 0.27
RIF1Q5UIP0 AC234783.1-201ENST00000441761 496 ntBASIC16.75■□□□□ 0.27
RIF1Q5UIP0 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.75■□□□□ 0.27
RIF1Q5UIP0 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
RIF1Q5UIP0 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RIF1Q5UIP0 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.75■□□□□ 0.27
RIF1Q5UIP0 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms