Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.1■□□□□ 0.01
RSPO1Q2MKA7 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.1■□□□□ 0.01
RSPO1Q2MKA7 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RSPO1Q2MKA7 AC148477.5-201ENST00000625164 1645 ntBASIC15.1■□□□□ 0.01
RSPO1Q2MKA7 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RSPO1Q2MKA7 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RSPO1Q2MKA7 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.1■□□□□ 0.01
RSPO1Q2MKA7 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.1■□□□□ 0.01
RSPO1Q2MKA7 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RSPO1Q2MKA7 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RSPO1Q2MKA7 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
RSPO1Q2MKA7 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RSPO1Q2MKA7 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RSPO1Q2MKA7 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RSPO1Q2MKA7 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RSPO1Q2MKA7 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RSPO1Q2MKA7 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RSPO1Q2MKA7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RSPO1Q2MKA7 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.1■□□□□ 0.01
RSPO1Q2MKA7 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.1■□□□□ 0.01
RSPO1Q2MKA7 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
RSPO1Q2MKA7 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.1■□□□□ 0.01
RSPO1Q2MKA7 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RSPO1Q2MKA7 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.1■□□□□ 0.01
RSPO1Q2MKA7 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
RSPO1Q2MKA7 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.1■□□□□ 0.01
RSPO1Q2MKA7 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.1■□□□□ 0.01
RSPO1Q2MKA7 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RSPO1Q2MKA7 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.1■□□□□ 0.01
RSPO1Q2MKA7 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RSPO1Q2MKA7 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RSPO1Q2MKA7 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RSPO1Q2MKA7 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RSPO1Q2MKA7 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RSPO1Q2MKA7 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
RSPO1Q2MKA7 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RSPO1Q2MKA7 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.1■□□□□ 0.01
RSPO1Q2MKA7 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RSPO1Q2MKA7 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.1■□□□□ 0.01
RSPO1Q2MKA7 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RSPO1Q2MKA7 AL121761.2-201ENST00000598007 1648 ntBASIC15.1■□□□□ 0.01
RSPO1Q2MKA7 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
RSPO1Q2MKA7 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.09■□□□□ 0.01
RSPO1Q2MKA7 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RSPO1Q2MKA7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
RSPO1Q2MKA7 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RSPO1Q2MKA7 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
RSPO1Q2MKA7 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RSPO1Q2MKA7 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.09■□□□□ 0.01
RSPO1Q2MKA7 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
RSPO1Q2MKA7 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RSPO1Q2MKA7 KLF4P1-201ENST00000412782 1185 ntBASIC15.09■□□□□ 0.01
RSPO1Q2MKA7 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.09■□□□□ 0.01
RSPO1Q2MKA7 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.09■□□□□ 0.01
RSPO1Q2MKA7 AC132008.2-207ENST00000454517 770 ntBASIC15.09■□□□□ 0.01
RSPO1Q2MKA7 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RSPO1Q2MKA7 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.09■□□□□ 0.01
RSPO1Q2MKA7 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.09■□□□□ 0.01
RSPO1Q2MKA7 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RSPO1Q2MKA7 AL591684.3-201ENST00000605187 298 ntBASIC15.09■□□□□ 0.01
RSPO1Q2MKA7 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.09■□□□□ 0.01
RSPO1Q2MKA7 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
RSPO1Q2MKA7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RSPO1Q2MKA7 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RSPO1Q2MKA7 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
RSPO1Q2MKA7 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
RSPO1Q2MKA7 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.09■□□□□ 0.01
RSPO1Q2MKA7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
RSPO1Q2MKA7 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RSPO1Q2MKA7 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RSPO1Q2MKA7 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RSPO1Q2MKA7 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RSPO1Q2MKA7 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RSPO1Q2MKA7 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RSPO1Q2MKA7 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RSPO1Q2MKA7 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
RSPO1Q2MKA7 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
RSPO1Q2MKA7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RSPO1Q2MKA7 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RSPO1Q2MKA7 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RSPO1Q2MKA7 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.08■□□□□ 0
RSPO1Q2MKA7 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
RSPO1Q2MKA7 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.08■□□□□ 0
RSPO1Q2MKA7 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RSPO1Q2MKA7 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.08■□□□□ 0
RSPO1Q2MKA7 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RSPO1Q2MKA7 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.08■□□□□ 0
RSPO1Q2MKA7 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.08■□□□□ 0
RSPO1Q2MKA7 SPDYE21P-201ENST00000413323 827 ntBASIC15.08■□□□□ 0
RSPO1Q2MKA7 NUS1P2-201ENST00000417358 873 ntBASIC15.08■□□□□ 0
RSPO1Q2MKA7 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.08■□□□□ 0
RSPO1Q2MKA7 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.08■□□□□ 0
RSPO1Q2MKA7 NUS1P1-201ENST00000446295 882 ntBASIC15.08■□□□□ 0
RSPO1Q2MKA7 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
RSPO1Q2MKA7 FOSL1P1-201ENST00000511041 816 ntBASIC15.08■□□□□ 0
RSPO1Q2MKA7 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.08■□□□□ 0
RSPO1Q2MKA7 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RSPO1Q2MKA7 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
RSPO1Q2MKA7 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
RSPO1Q2MKA7 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms