Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.41■□□□□ 0.54
UBE3AQ05086 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.41■□□□□ 0.54
UBE3AQ05086 AC002056.1-201ENST00000395613 760 ntBASIC18.41■□□□□ 0.54
UBE3AQ05086 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
UBE3AQ05086 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBE3AQ05086 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.41■□□□□ 0.54
UBE3AQ05086 COX20P2-201ENST00000452636 358 ntBASIC18.41■□□□□ 0.54
UBE3AQ05086 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
UBE3AQ05086 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.41■□□□□ 0.54
UBE3AQ05086 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.41■□□□□ 0.54
UBE3AQ05086 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.41■□□□□ 0.54
UBE3AQ05086 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.41■□□□□ 0.54
UBE3AQ05086 AC015911.4-201ENST00000588022 1070 ntBASIC18.41■□□□□ 0.54
UBE3AQ05086 LINC00628-201ENST00000628516 1289 ntBASIC18.41■□□□□ 0.54
UBE3AQ05086 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.41■□□□□ 0.54
UBE3AQ05086 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBE3AQ05086 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBE3AQ05086 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
UBE3AQ05086 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
UBE3AQ05086 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBE3AQ05086 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBE3AQ05086 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBE3AQ05086 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
UBE3AQ05086 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBE3AQ05086 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBE3AQ05086 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
UBE3AQ05086 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBE3AQ05086 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UBE3AQ05086 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
UBE3AQ05086 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UBE3AQ05086 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBE3AQ05086 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UBE3AQ05086 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UBE3AQ05086 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
UBE3AQ05086 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UBE3AQ05086 AL513480.1-201ENST00000451731 511 ntBASIC18.4■□□□□ 0.54
UBE3AQ05086 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.4■□□□□ 0.54
UBE3AQ05086 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.4■□□□□ 0.54
UBE3AQ05086 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UBE3AQ05086 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.4■□□□□ 0.54
UBE3AQ05086 ACTL9-202ENST00000612068 1252 ntBASIC18.4■□□□□ 0.54
UBE3AQ05086 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.4■□□□□ 0.54
UBE3AQ05086 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UBE3AQ05086 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UBE3AQ05086 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UBE3AQ05086 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UBE3AQ05086 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
UBE3AQ05086 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBE3AQ05086 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UBE3AQ05086 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
UBE3AQ05086 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.54
UBE3AQ05086 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.54
UBE3AQ05086 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.39■□□□□ 0.54
UBE3AQ05086 AC006116.8-202ENST00000587620 1550 ntBASIC18.39■□□□□ 0.53
UBE3AQ05086 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBE3AQ05086 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBE3AQ05086 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UBE3AQ05086 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBE3AQ05086 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBE3AQ05086 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBE3AQ05086 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBE3AQ05086 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.39■□□□□ 0.53
UBE3AQ05086 ADH5P3-201ENST00000433842 1137 ntBASIC18.39■□□□□ 0.53
UBE3AQ05086 FAM86GP-201ENST00000448322 971 ntBASIC18.39■□□□□ 0.53
UBE3AQ05086 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.39■□□□□ 0.53
UBE3AQ05086 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.39■□□□□ 0.53
UBE3AQ05086 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.39■□□□□ 0.53
UBE3AQ05086 AC067863.1-201ENST00000494933 530 ntBASIC18.39■□□□□ 0.53
UBE3AQ05086 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
UBE3AQ05086 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.39■□□□□ 0.53
UBE3AQ05086 FAM86C2P-203ENST00000528684 1004 ntBASIC18.39■□□□□ 0.53
UBE3AQ05086 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.39■□□□□ 0.53
UBE3AQ05086 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBE3AQ05086 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBE3AQ05086 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.39■□□□□ 0.53
UBE3AQ05086 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.39■□□□□ 0.53
UBE3AQ05086 AC129492.6-201ENST00000611383 1305 ntBASIC18.39■□□□□ 0.53
UBE3AQ05086 BX323043.1-201ENST00000641006 1765 ntBASIC18.39■□□□□ 0.53
UBE3AQ05086 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBE3AQ05086 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBE3AQ05086 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.39■□□□□ 0.53
UBE3AQ05086 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.39■□□□□ 0.53
UBE3AQ05086 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.39■□□□□ 0.53
UBE3AQ05086 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UBE3AQ05086 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBE3AQ05086 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.39■□□□□ 0.53
UBE3AQ05086 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UBE3AQ05086 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.38■□□□□ 0.53
UBE3AQ05086 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBE3AQ05086 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBE3AQ05086 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBE3AQ05086 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBE3AQ05086 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBE3AQ05086 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.38■□□□□ 0.53
UBE3AQ05086 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UBE3AQ05086 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.38■□□□□ 0.53
UBE3AQ05086 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.38■□□□□ 0.53
UBE3AQ05086 AC109322.1-201ENST00000524499 1264 ntBASIC18.38■□□□□ 0.53
UBE3AQ05086 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UBE3AQ05086 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms