Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
H3F3AP84243 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.62■□□□□ 0.09
H3F3AP84243 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
H3F3AP84243 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
H3F3AP84243 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
H3F3AP84243 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
H3F3AP84243 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
H3F3AP84243 AC079776.2-201ENST00000641154 1609 ntBASIC15.62■□□□□ 0.09
H3F3AP84243 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
H3F3AP84243 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.62■□□□□ 0.09
H3F3AP84243 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
H3F3AP84243 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
H3F3AP84243 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
H3F3AP84243 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
H3F3AP84243 AKR1C7P-201ENST00000305623 895 ntBASIC15.62■□□□□ 0.09
H3F3AP84243 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
H3F3AP84243 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
H3F3AP84243 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
H3F3AP84243 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
H3F3AP84243 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.62■□□□□ 0.09
H3F3AP84243 SPDYE21P-201ENST00000413323 827 ntBASIC15.62■□□□□ 0.09
H3F3AP84243 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.62■□□□□ 0.09
H3F3AP84243 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.62■□□□□ 0.09
H3F3AP84243 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.62■□□□□ 0.09
H3F3AP84243 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
H3F3AP84243 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.62■□□□□ 0.09
H3F3AP84243 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.62■□□□□ 0.09
H3F3AP84243 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.62■□□□□ 0.09
H3F3AP84243 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.62■□□□□ 0.09
H3F3AP84243 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
H3F3AP84243 IFNL4P1-201ENST00000607083 540 ntBASIC15.62■□□□□ 0.09
H3F3AP84243 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
H3F3AP84243 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.62■□□□□ 0.09
H3F3AP84243 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.62■□□□□ 0.09
H3F3AP84243 AL355877.3-201ENST00000622820 899 ntBASIC15.62■□□□□ 0.09
H3F3AP84243 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
H3F3AP84243 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
H3F3AP84243 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
H3F3AP84243 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
H3F3AP84243 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
H3F3AP84243 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.62■□□□□ 0.09
H3F3AP84243 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
H3F3AP84243 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
H3F3AP84243 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
H3F3AP84243 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
H3F3AP84243 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H3F3AP84243 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H3F3AP84243 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
H3F3AP84243 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
H3F3AP84243 AC016396.2-201ENST00000562575 1417 ntBASIC15.61■□□□□ 0.09
H3F3AP84243 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
H3F3AP84243 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.61■□□□□ 0.09
H3F3AP84243 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H3F3AP84243 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H3F3AP84243 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
H3F3AP84243 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H3F3AP84243 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H3F3AP84243 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.61■□□□□ 0.09
H3F3AP84243 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.61■□□□□ 0.09
H3F3AP84243 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
H3F3AP84243 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H3F3AP84243 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
H3F3AP84243 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.61■□□□□ 0.09
H3F3AP84243 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.61■□□□□ 0.09
H3F3AP84243 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.61■□□□□ 0.09
H3F3AP84243 KLF4P1-201ENST00000412782 1185 ntBASIC15.61■□□□□ 0.09
H3F3AP84243 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.61■□□□□ 0.09
H3F3AP84243 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.61■□□□□ 0.09
H3F3AP84243 PRYP5-201ENST00000451909 266 ntBASIC15.61■□□□□ 0.09
H3F3AP84243 SAPCD2P3-201ENST00000455031 850 ntBASIC15.61■□□□□ 0.09
H3F3AP84243 STK19B-204ENST00000512515 211 ntBASIC15.61■□□□□ 0.09
H3F3AP84243 KRT126P-201ENST00000549467 1181 ntBASIC15.61■□□□□ 0.09
H3F3AP84243 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.61■□□□□ 0.09
H3F3AP84243 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.61■□□□□ 0.09
H3F3AP84243 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H3F3AP84243 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H3F3AP84243 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.61■□□□□ 0.09
H3F3AP84243 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.61■□□□□ 0.09
H3F3AP84243 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H3F3AP84243 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H3F3AP84243 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.61■□□□□ 0.09
H3F3AP84243 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
H3F3AP84243 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H3F3AP84243 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H3F3AP84243 AC046185.3-201ENST00000623228 1824 ntBASIC15.61■□□□□ 0.09
H3F3AP84243 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H3F3AP84243 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.61■□□□□ 0.09
H3F3AP84243 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.61■□□□□ 0.09
H3F3AP84243 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.61■□□□□ 0.09
H3F3AP84243 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
H3F3AP84243 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H3F3AP84243 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.6■□□□□ 0.09
H3F3AP84243 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
H3F3AP84243 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
H3F3AP84243 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
H3F3AP84243 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
H3F3AP84243 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
H3F3AP84243 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
H3F3AP84243 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.6■□□□□ 0.09
H3F3AP84243 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms