Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CX3CL1P78423 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CX3CL1P78423 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CX3CL1P78423 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CX3CL1P78423 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
CX3CL1P78423 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CX3CL1P78423 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
CX3CL1P78423 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CX3CL1P78423 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CX3CL1P78423 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CX3CL1P78423 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CX3CL1P78423 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CX3CL1P78423 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
CX3CL1P78423 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CX3CL1P78423 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CX3CL1P78423 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.11□□□□□ -0.15
CX3CL1P78423 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CX3CL1P78423 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CX3CL1P78423 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.11□□□□□ -0.15
CX3CL1P78423 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CX3CL1P78423 AC069148.1-201ENST00000608741 768 ntBASIC14.11□□□□□ -0.15
CX3CL1P78423 AL353801.3-201ENST00000609898 542 ntBASIC14.11□□□□□ -0.15
CX3CL1P78423 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CX3CL1P78423 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.11□□□□□ -0.15
CX3CL1P78423 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CX3CL1P78423 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CX3CL1P78423 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
CX3CL1P78423 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CX3CL1P78423 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CX3CL1P78423 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14.11□□□□□ -0.15
CX3CL1P78423 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.11□□□□□ -0.15
CX3CL1P78423 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.11□□□□□ -0.15
CX3CL1P78423 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.11□□□□□ -0.15
CX3CL1P78423 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CX3CL1P78423 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CX3CL1P78423 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CX3CL1P78423 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CX3CL1P78423 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CX3CL1P78423 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CX3CL1P78423 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.1□□□□□ -0.15
CX3CL1P78423 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CX3CL1P78423 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.1□□□□□ -0.15
CX3CL1P78423 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CX3CL1P78423 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC14.1□□□□□ -0.15
CX3CL1P78423 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CX3CL1P78423 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.1□□□□□ -0.15
CX3CL1P78423 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
CX3CL1P78423 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CX3CL1P78423 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
CX3CL1P78423 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CX3CL1P78423 AL845331.1-201ENST00000424978 1190 ntBASIC14.1□□□□□ -0.15
CX3CL1P78423 AP002383.4-201ENST00000442518 975 ntBASIC14.1□□□□□ -0.15
CX3CL1P78423 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC14.1□□□□□ -0.15
CX3CL1P78423 VENTXP7-201ENST00000475503 772 ntBASIC14.1□□□□□ -0.15
CX3CL1P78423 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC14.1□□□□□ -0.15
CX3CL1P78423 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC14.1□□□□□ -0.15
CX3CL1P78423 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CX3CL1P78423 BCL10-202ENST00000620248 774 ntTSL 5 BASIC14.1□□□□□ -0.15
CX3CL1P78423 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CX3CL1P78423 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CX3CL1P78423 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CX3CL1P78423 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.1□□□□□ -0.15
CX3CL1P78423 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CX3CL1P78423 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CX3CL1P78423 AC097374.2-201ENST00000618617 1306 ntBASIC14.1□□□□□ -0.15
CX3CL1P78423 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CX3CL1P78423 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CX3CL1P78423 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CX3CL1P78423 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CX3CL1P78423 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.1□□□□□ -0.15
CX3CL1P78423 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC14.1□□□□□ -0.15
CX3CL1P78423 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CX3CL1P78423 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CX3CL1P78423 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CX3CL1P78423 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CX3CL1P78423 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC14.09□□□□□ -0.15
CX3CL1P78423 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CX3CL1P78423 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14.09□□□□□ -0.15
CX3CL1P78423 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.09□□□□□ -0.15
CX3CL1P78423 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CX3CL1P78423 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC14.09□□□□□ -0.15
CX3CL1P78423 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC14.09□□□□□ -0.15
CX3CL1P78423 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
CX3CL1P78423 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CX3CL1P78423 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CX3CL1P78423 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CX3CL1P78423 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
CX3CL1P78423 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.09□□□□□ -0.15
CX3CL1P78423 AC096633.1-201ENST00000422446 749 ntBASIC14.09□□□□□ -0.15
CX3CL1P78423 AC246785.2-201ENST00000432512 513 ntBASIC14.09□□□□□ -0.15
CX3CL1P78423 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC14.09□□□□□ -0.15
CX3CL1P78423 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CX3CL1P78423 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.09□□□□□ -0.15
CX3CL1P78423 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CX3CL1P78423 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CX3CL1P78423 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
CX3CL1P78423 AP002414.4-201ENST00000589764 1148 ntBASIC14.09□□□□□ -0.15
CX3CL1P78423 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.09□□□□□ -0.15
CX3CL1P78423 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC14.09□□□□□ -0.15
CX3CL1P78423 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms