Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CNTNAP1P78357 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CNTNAP1P78357 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CNTNAP1P78357 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.63■□□□□ 0.89
CNTNAP1P78357 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
CNTNAP1P78357 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNTNAP1P78357 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.63■□□□□ 0.89
CNTNAP1P78357 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CNTNAP1P78357 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.62■□□□□ 0.89
CNTNAP1P78357 AC093503.3-201ENST00000624917 2352 ntBASIC20.62■□□□□ 0.89
CNTNAP1P78357 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.62■□□□□ 0.89
CNTNAP1P78357 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CNTNAP1P78357 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CNTNAP1P78357 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNTNAP1P78357 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNTNAP1P78357 MYCLP1-201ENST00000372451 1075 ntBASIC20.62■□□□□ 0.89
CNTNAP1P78357 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC20.62■□□□□ 0.89
CNTNAP1P78357 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CNTNAP1P78357 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC20.62■□□□□ 0.89
CNTNAP1P78357 KRT17P7-201ENST00000451704 1104 ntBASIC20.62■□□□□ 0.89
CNTNAP1P78357 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC20.62■□□□□ 0.89
CNTNAP1P78357 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC20.62■□□□□ 0.89
CNTNAP1P78357 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.62■□□□□ 0.89
CNTNAP1P78357 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNTNAP1P78357 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.62■□□□□ 0.89
CNTNAP1P78357 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.62■□□□□ 0.89
CNTNAP1P78357 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC20.62■□□□□ 0.89
CNTNAP1P78357 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CNTNAP1P78357 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNTNAP1P78357 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CNTNAP1P78357 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNTNAP1P78357 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
CNTNAP1P78357 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNTNAP1P78357 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNTNAP1P78357 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CNTNAP1P78357 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNTNAP1P78357 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC20.61■□□□□ 0.89
CNTNAP1P78357 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNTNAP1P78357 RPL30-202ENST00000396070 440 ntTSL 2 BASIC20.61■□□□□ 0.89
CNTNAP1P78357 AL355306.1-201ENST00000415580 579 ntBASIC20.61■□□□□ 0.89
CNTNAP1P78357 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNTNAP1P78357 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC20.61■□□□□ 0.89
CNTNAP1P78357 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC20.61■□□□□ 0.89
CNTNAP1P78357 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC20.61■□□□□ 0.89
CNTNAP1P78357 SERBP1P5-201ENST00000510079 1181 ntBASIC20.61■□□□□ 0.89
CNTNAP1P78357 KRT8P48-201ENST00000515599 1220 ntBASIC20.61■□□□□ 0.89
CNTNAP1P78357 IFT20-216ENST00000588477 774 ntTSL 5 BASIC20.61■□□□□ 0.89
CNTNAP1P78357 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC20.61■□□□□ 0.89
CNTNAP1P78357 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.61■□□□□ 0.89
CNTNAP1P78357 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC20.61■□□□□ 0.89
CNTNAP1P78357 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC20.61■□□□□ 0.89
CNTNAP1P78357 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNTNAP1P78357 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNTNAP1P78357 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.61■□□□□ 0.89
CNTNAP1P78357 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CNTNAP1P78357 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.61■□□□□ 0.89
CNTNAP1P78357 PI4KAP1-204ENST00000612579 1703 ntBASIC20.61■□□□□ 0.89
CNTNAP1P78357 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CNTNAP1P78357 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CNTNAP1P78357 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNTNAP1P78357 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNTNAP1P78357 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CNTNAP1P78357 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC20.6■□□□□ 0.89
CNTNAP1P78357 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
CNTNAP1P78357 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNTNAP1P78357 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CNTNAP1P78357 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CNTNAP1P78357 PIN1P1-201ENST00000412108 996 ntBASIC20.6■□□□□ 0.89
CNTNAP1P78357 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC20.6■□□□□ 0.89
CNTNAP1P78357 KRT18P32-201ENST00000424695 1287 ntBASIC20.6■□□□□ 0.89
CNTNAP1P78357 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC20.6■□□□□ 0.89
CNTNAP1P78357 CXCL1P1-201ENST00000502804 216 ntBASIC20.6■□□□□ 0.89
CNTNAP1P78357 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNTNAP1P78357 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNTNAP1P78357 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.6■□□□□ 0.89
CNTNAP1P78357 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC20.6■□□□□ 0.89
CNTNAP1P78357 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CNTNAP1P78357 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC20.6■□□□□ 0.89
CNTNAP1P78357 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC20.6■□□□□ 0.89
CNTNAP1P78357 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CNTNAP1P78357 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNTNAP1P78357 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CNTNAP1P78357 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC20.6■□□□□ 0.89
CNTNAP1P78357 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CNTNAP1P78357 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNTNAP1P78357 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNTNAP1P78357 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNTNAP1P78357 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC20.59■□□□□ 0.89
CNTNAP1P78357 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC20.59■□□□□ 0.89
CNTNAP1P78357 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC20.59■□□□□ 0.89
CNTNAP1P78357 AL512638.1-201ENST00000457493 794 ntBASIC20.59■□□□□ 0.89
CNTNAP1P78357 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CNTNAP1P78357 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC20.59■□□□□ 0.89
CNTNAP1P78357 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNTNAP1P78357 TSFM-210ENST00000550559 897 ntTSL 5 BASIC20.59■□□□□ 0.89
CNTNAP1P78357 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC20.59■□□□□ 0.89
CNTNAP1P78357 AL158211.3-201ENST00000607385 239 ntBASIC20.59■□□□□ 0.89
CNTNAP1P78357 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC20.59■□□□□ 0.89
CNTNAP1P78357 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.59■□□□□ 0.89
CNTNAP1P78357 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms