Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USP46P62068 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
USP46P62068 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP46P62068 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP46P62068 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP46P62068 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.37■□□□□ 0.53
USP46P62068 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP46P62068 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USP46P62068 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP46P62068 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP46P62068 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.37■□□□□ 0.53
USP46P62068 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USP46P62068 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USP46P62068 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP46P62068 AC011270.2-201ENST00000624293 2550 ntBASIC18.37■□□□□ 0.53
USP46P62068 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
USP46P62068 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.36■□□□□ 0.53
USP46P62068 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP46P62068 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
USP46P62068 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP46P62068 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP46P62068 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP46P62068 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
USP46P62068 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
USP46P62068 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP46P62068 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.36■□□□□ 0.53
USP46P62068 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.36■□□□□ 0.53
USP46P62068 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
USP46P62068 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP46P62068 AC073621.1-201ENST00000392730 636 ntBASIC18.36■□□□□ 0.53
USP46P62068 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
USP46P62068 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.36■□□□□ 0.53
USP46P62068 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.36■□□□□ 0.53
USP46P62068 KRT18P27-201ENST00000427733 1299 ntBASIC18.36■□□□□ 0.53
USP46P62068 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.36■□□□□ 0.53
USP46P62068 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.36■□□□□ 0.53
USP46P62068 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
USP46P62068 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
USP46P62068 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
USP46P62068 STK19B-204ENST00000512515 211 ntBASIC18.36■□□□□ 0.53
USP46P62068 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP46P62068 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
USP46P62068 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.36■□□□□ 0.53
USP46P62068 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP46P62068 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
USP46P62068 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
USP46P62068 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.36■□□□□ 0.53
USP46P62068 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
USP46P62068 AC006116.8-202ENST00000587620 1550 ntBASIC18.36■□□□□ 0.53
USP46P62068 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
USP46P62068 AC009336.1-201ENST00000608941 1553 ntBASIC18.36■□□□□ 0.53
USP46P62068 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.36■□□□□ 0.53
USP46P62068 AC117500.6-201ENST00000624871 588 ntBASIC18.36■□□□□ 0.53
USP46P62068 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP46P62068 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP46P62068 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP46P62068 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
USP46P62068 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
USP46P62068 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
USP46P62068 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP46P62068 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.35■□□□□ 0.53
USP46P62068 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP46P62068 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP46P62068 AC104109.2-201ENST00000602919 1418 ntBASIC18.35■□□□□ 0.53
USP46P62068 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP46P62068 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP46P62068 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP46P62068 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP46P62068 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.35■□□□□ 0.53
USP46P62068 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.35■□□□□ 0.53
USP46P62068 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.35■□□□□ 0.53
USP46P62068 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
USP46P62068 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.35■□□□□ 0.53
USP46P62068 RNA5SP415-201ENST00000517246 115 ntBASIC18.35■□□□□ 0.53
USP46P62068 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.35■□□□□ 0.53
USP46P62068 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.35■□□□□ 0.53
USP46P62068 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.35■□□□□ 0.53
USP46P62068 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP46P62068 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
USP46P62068 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
USP46P62068 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP46P62068 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP46P62068 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.35■□□□□ 0.53
USP46P62068 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
USP46P62068 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.35■□□□□ 0.53
USP46P62068 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
USP46P62068 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP46P62068 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP46P62068 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP46P62068 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP46P62068 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USP46P62068 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP46P62068 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.34■□□□□ 0.53
USP46P62068 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP46P62068 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
USP46P62068 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP46P62068 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP46P62068 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP46P62068 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.34■□□□□ 0.53
USP46P62068 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms