Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16■□□□□ 0.15
CDC42P60953 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16■□□□□ 0.15
CDC42P60953 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16■□□□□ 0.15
CDC42P60953 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDC42P60953 ITM2C-210ENST00000620962 501 ntBASIC16■□□□□ 0.15
CDC42P60953 AC092865.7-201ENST00000641832 219 ntBASIC16■□□□□ 0.15
CDC42P60953 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16■□□□□ 0.15
CDC42P60953 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CDC42P60953 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
CDC42P60953 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDC42P60953 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CDC42P60953 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16■□□□□ 0.15
CDC42P60953 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
CDC42P60953 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CDC42P60953 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDC42P60953 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CDC42P60953 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
CDC42P60953 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CDC42P60953 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDC42P60953 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CDC42P60953 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDC42P60953 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDC42P60953 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDC42P60953 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16■□□□□ 0.15
CDC42P60953 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16■□□□□ 0.15
CDC42P60953 LINC02012-201ENST00000608206 1725 ntBASIC15.99■□□□□ 0.15
CDC42P60953 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CDC42P60953 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.99■□□□□ 0.15
CDC42P60953 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDC42P60953 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.99■□□□□ 0.15
CDC42P60953 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC15.99■□□□□ 0.15
CDC42P60953 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDC42P60953 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDC42P60953 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDC42P60953 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDC42P60953 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDC42P60953 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDC42P60953 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CDC42P60953 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDC42P60953 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDC42P60953 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDC42P60953 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC15.99■□□□□ 0.15
CDC42P60953 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDC42P60953 PVRIG2P-201ENST00000435460 978 ntBASIC15.99■□□□□ 0.15
CDC42P60953 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.99■□□□□ 0.15
CDC42P60953 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.99■□□□□ 0.15
CDC42P60953 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.99■□□□□ 0.15
CDC42P60953 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CDC42P60953 MIR3917-201ENST00000580971 93 ntBASIC15.99■□□□□ 0.15
CDC42P60953 AC024243.1-201ENST00000609234 778 ntBASIC15.99■□□□□ 0.15
CDC42P60953 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDC42P60953 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.99■□□□□ 0.15
CDC42P60953 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CDC42P60953 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.99■□□□□ 0.15
CDC42P60953 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDC42P60953 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDC42P60953 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDC42P60953 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.99■□□□□ 0.15
CDC42P60953 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDC42P60953 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDC42P60953 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDC42P60953 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDC42P60953 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CDC42P60953 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDC42P60953 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDC42P60953 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
CDC42P60953 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDC42P60953 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDC42P60953 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDC42P60953 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDC42P60953 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CDC42P60953 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDC42P60953 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.98■□□□□ 0.15
CDC42P60953 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.98■□□□□ 0.15
CDC42P60953 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.98■□□□□ 0.15
CDC42P60953 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.98■□□□□ 0.15
CDC42P60953 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDC42P60953 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.98■□□□□ 0.15
CDC42P60953 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDC42P60953 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDC42P60953 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDC42P60953 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDC42P60953 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDC42P60953 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDC42P60953 ABHD17AP1-201ENST00000358206 933 ntBASIC15.98■□□□□ 0.15
CDC42P60953 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDC42P60953 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC15.98■□□□□ 0.15
CDC42P60953 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDC42P60953 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDC42P60953 AC007663.1-201ENST00000438948 1240 ntBASIC15.98■□□□□ 0.15
CDC42P60953 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.98■□□□□ 0.15
CDC42P60953 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDC42P60953 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC15.98■□□□□ 0.15
CDC42P60953 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.98■□□□□ 0.15
CDC42P60953 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC15.98■□□□□ 0.15
CDC42P60953 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDC42P60953 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC15.98■□□□□ 0.15
CDC42P60953 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC15.98■□□□□ 0.15
CDC42P60953 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDC42P60953 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms