Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.35■□□□□ 0.05
DEFA3P59666 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DEFA3P59666 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DEFA3P59666 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
DEFA3P59666 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
DEFA3P59666 KRT8P50-201ENST00000562022 1438 ntBASIC15.34■□□□□ 0.05
DEFA3P59666 AC010980.2-201ENST00000587099 1412 ntBASIC15.34■□□□□ 0.05
DEFA3P59666 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DEFA3P59666 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
DEFA3P59666 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
DEFA3P59666 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DEFA3P59666 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.34■□□□□ 0.05
DEFA3P59666 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
DEFA3P59666 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DEFA3P59666 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.34■□□□□ 0.05
DEFA3P59666 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
DEFA3P59666 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DEFA3P59666 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
DEFA3P59666 AC123595.1-201ENST00000440769 1046 ntBASIC15.34■□□□□ 0.05
DEFA3P59666 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DEFA3P59666 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC15.34■□□□□ 0.05
DEFA3P59666 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC15.34■□□□□ 0.05
DEFA3P59666 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC15.34■□□□□ 0.05
DEFA3P59666 AC106739.1-201ENST00000617035 715 ntBASIC15.34■□□□□ 0.05
DEFA3P59666 AL136967.2-201ENST00000623968 743 ntBASIC15.34■□□□□ 0.05
DEFA3P59666 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC15.34■□□□□ 0.05
DEFA3P59666 HLA-A-209ENST00000638375 975 ntBASIC15.34■□□□□ 0.05
DEFA3P59666 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
DEFA3P59666 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DEFA3P59666 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
DEFA3P59666 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
DEFA3P59666 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
DEFA3P59666 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
DEFA3P59666 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
DEFA3P59666 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
DEFA3P59666 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
DEFA3P59666 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
DEFA3P59666 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DEFA3P59666 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DEFA3P59666 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.34■□□□□ 0.05
DEFA3P59666 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
DEFA3P59666 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
DEFA3P59666 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
DEFA3P59666 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
DEFA3P59666 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DEFA3P59666 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
DEFA3P59666 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
DEFA3P59666 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
DEFA3P59666 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.33■□□□□ 0.05
DEFA3P59666 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
DEFA3P59666 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.05
DEFA3P59666 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
DEFA3P59666 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.33■□□□□ 0.05
DEFA3P59666 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.33■□□□□ 0.05
DEFA3P59666 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.05
DEFA3P59666 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
DEFA3P59666 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
DEFA3P59666 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
DEFA3P59666 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
DEFA3P59666 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.33■□□□□ 0.04
DEFA3P59666 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
DEFA3P59666 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
DEFA3P59666 MIR149-201ENST00000384879 89 ntBASIC15.33■□□□□ 0.04
DEFA3P59666 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.33■□□□□ 0.04
DEFA3P59666 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
DEFA3P59666 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.33■□□□□ 0.04
DEFA3P59666 AC116407.2-201ENST00000613639 860 ntBASIC15.33■□□□□ 0.04
DEFA3P59666 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC15.33■□□□□ 0.04
DEFA3P59666 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
DEFA3P59666 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
DEFA3P59666 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.33■□□□□ 0.04
DEFA3P59666 AC022898.2-201ENST00000616822 1312 ntBASIC15.33■□□□□ 0.04
DEFA3P59666 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
DEFA3P59666 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
DEFA3P59666 CRK-204ENST00000574295 1391 ntTSL 5 BASIC15.33■□□□□ 0.04
DEFA3P59666 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
DEFA3P59666 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.33■□□□□ 0.04
DEFA3P59666 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
DEFA3P59666 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.33■□□□□ 0.04
DEFA3P59666 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
DEFA3P59666 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
DEFA3P59666 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.33■□□□□ 0.04
DEFA3P59666 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
DEFA3P59666 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.33■□□□□ 0.04
DEFA3P59666 AC138969.2-201ENST00000532739 9932 ntBASIC15.32■□□□□ 0.04
DEFA3P59666 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
DEFA3P59666 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
DEFA3P59666 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DEFA3P59666 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
DEFA3P59666 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
DEFA3P59666 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DEFA3P59666 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DEFA3P59666 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.32■□□□□ 0.04
DEFA3P59666 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
DEFA3P59666 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.32■□□□□ 0.04
DEFA3P59666 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
DEFA3P59666 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.32■□□□□ 0.04
DEFA3P59666 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
DEFA3P59666 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.32■□□□□ 0.04
DEFA3P59666 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms