Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RHBDL3P58872 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC20.53■□□□□ 0.88
RHBDL3P58872 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC20.53■□□□□ 0.88
RHBDL3P58872 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC20.53■□□□□ 0.88
RHBDL3P58872 CYP51A1P2-201ENST00000419457 1499 ntBASIC20.53■□□□□ 0.88
RHBDL3P58872 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RHBDL3P58872 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RHBDL3P58872 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.53■□□□□ 0.88
RHBDL3P58872 AC133963.1-201ENST00000504166 1679 ntBASIC20.53■□□□□ 0.88
RHBDL3P58872 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RHBDL3P58872 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.53■□□□□ 0.88
RHBDL3P58872 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.53■□□□□ 0.88
RHBDL3P58872 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RHBDL3P58872 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RHBDL3P58872 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
RHBDL3P58872 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.52■□□□□ 0.88
RHBDL3P58872 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
RHBDL3P58872 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RHBDL3P58872 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RHBDL3P58872 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
RHBDL3P58872 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RHBDL3P58872 AC254562.1-201ENST00000417586 456 ntBASIC20.52■□□□□ 0.88
RHBDL3P58872 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC20.52■□□□□ 0.88
RHBDL3P58872 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
RHBDL3P58872 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC20.52■□□□□ 0.88
RHBDL3P58872 AC007064.4-201ENST00000637740 555 ntBASIC20.52■□□□□ 0.88
RHBDL3P58872 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
RHBDL3P58872 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
RHBDL3P58872 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.52■□□□□ 0.88
RHBDL3P58872 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RHBDL3P58872 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
RHBDL3P58872 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RHBDL3P58872 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.51■□□□□ 0.87
RHBDL3P58872 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
RHBDL3P58872 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RHBDL3P58872 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RHBDL3P58872 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RHBDL3P58872 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.51■□□□□ 0.87
RHBDL3P58872 AC008764.6-201ENST00000595909 2069 ntBASIC20.51■□□□□ 0.87
RHBDL3P58872 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RHBDL3P58872 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RHBDL3P58872 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
RHBDL3P58872 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RHBDL3P58872 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
RHBDL3P58872 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC20.51■□□□□ 0.87
RHBDL3P58872 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC20.51■□□□□ 0.87
RHBDL3P58872 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC20.51■□□□□ 0.87
RHBDL3P58872 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RHBDL3P58872 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RHBDL3P58872 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.51■□□□□ 0.87
RHBDL3P58872 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RHBDL3P58872 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.51■□□□□ 0.87
RHBDL3P58872 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RHBDL3P58872 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RHBDL3P58872 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RHBDL3P58872 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.5■□□□□ 0.87
RHBDL3P58872 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC20.5■□□□□ 0.87
RHBDL3P58872 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
RHBDL3P58872 AL390961.4-201ENST00000623958 2535 ntBASIC20.5■□□□□ 0.87
RHBDL3P58872 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RHBDL3P58872 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.5■□□□□ 0.87
RHBDL3P58872 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RHBDL3P58872 DDT-204ENST00000404092 805 ntTSL 3 BASIC20.5■□□□□ 0.87
RHBDL3P58872 LBH-203ENST00000404397 543 ntTSL 4 BASIC20.5■□□□□ 0.87
RHBDL3P58872 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
RHBDL3P58872 FAM58CP-201ENST00000435741 640 ntBASIC20.5■□□□□ 0.87
RHBDL3P58872 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC20.5■□□□□ 0.87
RHBDL3P58872 CEND1P1-201ENST00000451006 455 ntBASIC20.5■□□□□ 0.87
RHBDL3P58872 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC20.5■□□□□ 0.87
RHBDL3P58872 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC20.5■□□□□ 0.87
RHBDL3P58872 AC107918.2-201ENST00000530817 355 ntBASIC20.5■□□□□ 0.87
RHBDL3P58872 PUS1-205ENST00000535067 838 ntTSL 3 BASIC20.5■□□□□ 0.87
RHBDL3P58872 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC20.5■□□□□ 0.87
RHBDL3P58872 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RHBDL3P58872 HNRNPRP1-201ENST00000453465 1695 ntBASIC20.5■□□□□ 0.87
RHBDL3P58872 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.5■□□□□ 0.87
RHBDL3P58872 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RHBDL3P58872 NEFHP1-201ENST00000412845 2629 ntBASIC20.5■□□□□ 0.87
RHBDL3P58872 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.5■□□□□ 0.87
RHBDL3P58872 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RHBDL3P58872 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RHBDL3P58872 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RHBDL3P58872 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC20.49■□□□□ 0.87
RHBDL3P58872 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RHBDL3P58872 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RHBDL3P58872 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RHBDL3P58872 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
RHBDL3P58872 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RHBDL3P58872 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RHBDL3P58872 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC20.49■□□□□ 0.87
RHBDL3P58872 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
RHBDL3P58872 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC20.49■□□□□ 0.87
RHBDL3P58872 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC20.49■□□□□ 0.87
RHBDL3P58872 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC20.49■□□□□ 0.87
RHBDL3P58872 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC20.49■□□□□ 0.87
RHBDL3P58872 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC20.49■□□□□ 0.87
RHBDL3P58872 MED16-214ENST00000617672 554 ntTSL 5 BASIC20.49■□□□□ 0.87
RHBDL3P58872 AC091812.2-201ENST00000619081 385 ntBASIC20.49■□□□□ 0.87
RHBDL3P58872 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC20.49■□□□□ 0.87
RHBDL3P58872 AC092902.6-201ENST00000641783 218 ntBASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms