Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 KRT18P31-201ENST00000506277 1292 ntBASIC16.05■□□□□ 0.16
CLDN20P56880 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.05■□□□□ 0.16
CLDN20P56880 AC091304.2-201ENST00000564639 760 ntBASIC16.05■□□□□ 0.16
CLDN20P56880 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.05■□□□□ 0.16
CLDN20P56880 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN20P56880 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN20P56880 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.05■□□□□ 0.16
CLDN20P56880 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.05■□□□□ 0.16
CLDN20P56880 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN20P56880 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CLDN20P56880 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CLDN20P56880 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CLDN20P56880 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.05■□□□□ 0.16
CLDN20P56880 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN20P56880 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN20P56880 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN20P56880 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.05■□□□□ 0.16
CLDN20P56880 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.05■□□□□ 0.16
CLDN20P56880 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN20P56880 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN20P56880 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.05■□□□□ 0.16
CLDN20P56880 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN20P56880 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.05■□□□□ 0.16
CLDN20P56880 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.05■□□□□ 0.16
CLDN20P56880 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CLDN20P56880 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN20P56880 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.04■□□□□ 0.16
CLDN20P56880 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.04■□□□□ 0.16
CLDN20P56880 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN20P56880 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN20P56880 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN20P56880 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.04■□□□□ 0.16
CLDN20P56880 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN20P56880 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN20P56880 UNC93B7-201ENST00000509439 705 ntBASIC16.04■□□□□ 0.16
CLDN20P56880 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.04■□□□□ 0.16
CLDN20P56880 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.04■□□□□ 0.16
CLDN20P56880 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.04■□□□□ 0.16
CLDN20P56880 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CLDN20P56880 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.04■□□□□ 0.16
CLDN20P56880 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.04■□□□□ 0.16
CLDN20P56880 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN20P56880 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CLDN20P56880 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.04■□□□□ 0.16
CLDN20P56880 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN20P56880 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN20P56880 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN20P56880 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN20P56880 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CLDN20P56880 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.04■□□□□ 0.16
CLDN20P56880 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN20P56880 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN20P56880 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN20P56880 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN20P56880 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN20P56880 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN20P56880 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN20P56880 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN20P56880 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN20P56880 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN20P56880 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN20P56880 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN20P56880 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.03■□□□□ 0.16
CLDN20P56880 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN20P56880 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.03■□□□□ 0.16
CLDN20P56880 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CLDN20P56880 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN20P56880 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN20P56880 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.03■□□□□ 0.16
CLDN20P56880 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN20P56880 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.03■□□□□ 0.16
CLDN20P56880 RCN1P2-201ENST00000398357 915 ntBASIC16.03■□□□□ 0.16
CLDN20P56880 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.03■□□□□ 0.16
CLDN20P56880 POM121L3P-201ENST00000419331 1163 ntBASIC16.03■□□□□ 0.16
CLDN20P56880 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.03■□□□□ 0.16
CLDN20P56880 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.03■□□□□ 0.16
CLDN20P56880 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.03■□□□□ 0.16
CLDN20P56880 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN20P56880 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.03■□□□□ 0.16
CLDN20P56880 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.03■□□□□ 0.16
CLDN20P56880 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN20P56880 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.03■□□□□ 0.16
CLDN20P56880 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN20P56880 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN20P56880 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN20P56880 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN20P56880 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CLDN20P56880 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.03■□□□□ 0.16
CLDN20P56880 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN20P56880 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN20P56880 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN20P56880 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CLDN20P56880 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN20P56880 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN20P56880 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN20P56880 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN20P56880 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CLDN20P56880 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN20P56880 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN20P56880 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms