Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PER3P56645 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PER3P56645 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
PER3P56645 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PER3P56645 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PER3P56645 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PER3P56645 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PER3P56645 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.21■□□□□ 0.19
PER3P56645 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PER3P56645 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PER3P56645 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PER3P56645 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.21■□□□□ 0.19
PER3P56645 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PER3P56645 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PER3P56645 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.21■□□□□ 0.19
PER3P56645 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.21■□□□□ 0.19
PER3P56645 MED15P5-201ENST00000423150 992 ntBASIC16.21■□□□□ 0.19
PER3P56645 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.21■□□□□ 0.19
PER3P56645 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.21■□□□□ 0.19
PER3P56645 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.21■□□□□ 0.19
PER3P56645 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.21■□□□□ 0.19
PER3P56645 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.21■□□□□ 0.19
PER3P56645 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.21■□□□□ 0.19
PER3P56645 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PER3P56645 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PER3P56645 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PER3P56645 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PER3P56645 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PER3P56645 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PER3P56645 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PER3P56645 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PER3P56645 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PER3P56645 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PER3P56645 AC073592.3-201ENST00000625118 1834 ntBASIC16.21■□□□□ 0.19
PER3P56645 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PER3P56645 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.21■□□□□ 0.18
PER3P56645 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
PER3P56645 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.21■□□□□ 0.18
PER3P56645 AC008894.3-201ENST00000624324 3103 ntBASIC16.21■□□□□ 0.18
PER3P56645 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PER3P56645 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PER3P56645 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PER3P56645 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PER3P56645 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PER3P56645 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PER3P56645 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PER3P56645 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
PER3P56645 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PER3P56645 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PER3P56645 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PER3P56645 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PER3P56645 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PER3P56645 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PER3P56645 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
PER3P56645 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PER3P56645 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
PER3P56645 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PER3P56645 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PER3P56645 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
PER3P56645 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PER3P56645 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PER3P56645 UPF3AP3-201ENST00000420996 769 ntBASIC16.2■□□□□ 0.18
PER3P56645 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PER3P56645 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.2■□□□□ 0.18
PER3P56645 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.2■□□□□ 0.18
PER3P56645 AC145285.3-201ENST00000564603 959 ntBASIC16.2■□□□□ 0.18
PER3P56645 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PER3P56645 AL139424.1-201ENST00000607572 797 ntBASIC16.2■□□□□ 0.18
PER3P56645 AC116407.3-201ENST00000623905 1129 ntBASIC16.2■□□□□ 0.18
PER3P56645 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PER3P56645 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PER3P56645 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PER3P56645 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.2■□□□□ 0.18
PER3P56645 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PER3P56645 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PER3P56645 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PER3P56645 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PER3P56645 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PER3P56645 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.2■□□□□ 0.18
PER3P56645 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PER3P56645 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PER3P56645 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PER3P56645 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PER3P56645 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
PER3P56645 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PER3P56645 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PER3P56645 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PER3P56645 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PER3P56645 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.19■□□□□ 0.18
PER3P56645 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PER3P56645 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PER3P56645 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
PER3P56645 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PER3P56645 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PER3P56645 AC018695.7-201ENST00000624587 2492 ntBASIC16.19■□□□□ 0.18
PER3P56645 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PER3P56645 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.19■□□□□ 0.18
PER3P56645 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PER3P56645 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.19■□□□□ 0.18
PER3P56645 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms