Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.1■□□□□ 0.17
SLC1A3P43003 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC1A3P43003 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC1A3P43003 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC1A3P43003 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC1A3P43003 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC1A3P43003 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC1A3P43003 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
SLC1A3P43003 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC1A3P43003 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC1A3P43003 AC125634.1-201ENST00000438758 1403 ntBASIC16.1■□□□□ 0.17
SLC1A3P43003 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.1■□□□□ 0.17
SLC1A3P43003 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SLC1A3P43003 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SLC1A3P43003 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC1A3P43003 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC1A3P43003 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC1A3P43003 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
SLC1A3P43003 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC1A3P43003 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC1A3P43003 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC1A3P43003 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC1A3P43003 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC1A3P43003 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC1A3P43003 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SLC1A3P43003 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC1A3P43003 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
SLC1A3P43003 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC1A3P43003 AL845331.1-201ENST00000424978 1190 ntBASIC16.09■□□□□ 0.17
SLC1A3P43003 AC005104.2-201ENST00000427818 678 ntBASIC16.09■□□□□ 0.17
SLC1A3P43003 TSSC2-201ENST00000450217 709 ntBASIC16.09■□□□□ 0.17
SLC1A3P43003 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.09■□□□□ 0.17
SLC1A3P43003 VENTXP7-201ENST00000475503 772 ntBASIC16.09■□□□□ 0.17
SLC1A3P43003 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC1A3P43003 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC1A3P43003 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC1A3P43003 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC1A3P43003 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC1A3P43003 AP000550.4-202ENST00000639755 178 ntBASIC16.09■□□□□ 0.17
SLC1A3P43003 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC1A3P43003 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC1A3P43003 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC1A3P43003 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC1A3P43003 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC1A3P43003 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC1A3P43003 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC1A3P43003 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC1A3P43003 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC1A3P43003 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC1A3P43003 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC1A3P43003 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.08■□□□□ 0.17
SLC1A3P43003 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.08■□□□□ 0.17
SLC1A3P43003 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.08■□□□□ 0.17
SLC1A3P43003 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.08■□□□□ 0.17
SLC1A3P43003 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
SLC1A3P43003 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.08■□□□□ 0.17
SLC1A3P43003 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SLC1A3P43003 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A3P43003 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SLC1A3P43003 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.08■□□□□ 0.16
SLC1A3P43003 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.08■□□□□ 0.16
SLC1A3P43003 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
SLC1A3P43003 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC1A3P43003 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.08■□□□□ 0.16
SLC1A3P43003 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.08■□□□□ 0.16
SLC1A3P43003 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.08■□□□□ 0.16
SLC1A3P43003 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A3P43003 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A3P43003 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC1A3P43003 AL138831.2-201ENST00000606564 490 ntBASIC16.08■□□□□ 0.16
SLC1A3P43003 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A3P43003 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SLC1A3P43003 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
SLC1A3P43003 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A3P43003 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A3P43003 AC010460.3-201ENST00000511359 1579 ntBASIC16.08■□□□□ 0.16
SLC1A3P43003 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
SLC1A3P43003 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A3P43003 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A3P43003 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.08■□□□□ 0.16
SLC1A3P43003 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A3P43003 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
SLC1A3P43003 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A3P43003 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A3P43003 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A3P43003 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
SLC1A3P43003 AL118508.1-201ENST00000613502 2345 ntBASIC16.07■□□□□ 0.16
SLC1A3P43003 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.07■□□□□ 0.16
SLC1A3P43003 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A3P43003 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A3P43003 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.07■□□□□ 0.16
SLC1A3P43003 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A3P43003 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A3P43003 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.07■□□□□ 0.16
SLC1A3P43003 AC007967.3-201ENST00000434308 558 ntBASIC16.07■□□□□ 0.16
SLC1A3P43003 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A3P43003 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.07■□□□□ 0.16
SLC1A3P43003 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC1A3P43003 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A3P43003 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms