Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TNFSF9P41273 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.87■□□□□ 0.61
TNFSF9P41273 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TNFSF9P41273 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TNFSF9P41273 AC073621.1-201ENST00000392730 636 ntBASIC18.87■□□□□ 0.61
TNFSF9P41273 LINC00982-205ENST00000420957 435 ntBASIC18.87■□□□□ 0.61
TNFSF9P41273 AL590627.1-203ENST00000421194 1026 ntBASIC18.87■□□□□ 0.61
TNFSF9P41273 IL9RP2-201ENST00000423948 1312 ntBASIC18.87■□□□□ 0.61
TNFSF9P41273 KRT18P27-201ENST00000427733 1299 ntBASIC18.87■□□□□ 0.61
TNFSF9P41273 NCF1C-201ENST00000438382 1427 ntBASIC18.87■□□□□ 0.61
TNFSF9P41273 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.87■□□□□ 0.61
TNFSF9P41273 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TNFSF9P41273 AC092910.1-201ENST00000482027 1129 ntBASIC18.87■□□□□ 0.61
TNFSF9P41273 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.87■□□□□ 0.61
TNFSF9P41273 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.87■□□□□ 0.61
TNFSF9P41273 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.87■□□□□ 0.61
TNFSF9P41273 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.87■□□□□ 0.61
TNFSF9P41273 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TNFSF9P41273 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.87■□□□□ 0.61
TNFSF9P41273 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TNFSF9P41273 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.87■□□□□ 0.61
TNFSF9P41273 AC120114.3-201ENST00000611923 658 ntBASIC18.87■□□□□ 0.61
TNFSF9P41273 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.87■□□□□ 0.61
TNFSF9P41273 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.87■□□□□ 0.61
TNFSF9P41273 AC004706.3-202ENST00000621574 984 ntBASIC18.87■□□□□ 0.61
TNFSF9P41273 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.87■□□□□ 0.61
TNFSF9P41273 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TNFSF9P41273 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TNFSF9P41273 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TNFSF9P41273 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TNFSF9P41273 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TNFSF9P41273 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNFSF9P41273 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNFSF9P41273 PCDHB18P-201ENST00000524813 2368 ntBASIC18.86■□□□□ 0.61
TNFSF9P41273 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TNFSF9P41273 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TNFSF9P41273 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNFSF9P41273 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNFSF9P41273 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNFSF9P41273 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TNFSF9P41273 AC006504.4-201ENST00000592118 1568 ntBASIC18.86■□□□□ 0.61
TNFSF9P41273 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNFSF9P41273 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
TNFSF9P41273 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNFSF9P41273 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.86■□□□□ 0.61
TNFSF9P41273 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNFSF9P41273 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNFSF9P41273 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
TNFSF9P41273 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNFSF9P41273 RPS2P28-201ENST00000314255 741 ntBASIC18.86■□□□□ 0.61
TNFSF9P41273 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.86■□□□□ 0.61
TNFSF9P41273 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.86■□□□□ 0.61
TNFSF9P41273 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.86■□□□□ 0.61
TNFSF9P41273 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.86■□□□□ 0.61
TNFSF9P41273 SLC25A1P1-201ENST00000528351 927 ntBASIC18.86■□□□□ 0.61
TNFSF9P41273 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.86■□□□□ 0.61
TNFSF9P41273 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.86■□□□□ 0.61
TNFSF9P41273 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.86■□□□□ 0.61
TNFSF9P41273 AC105339.3-201ENST00000560043 636 ntBASIC18.86■□□□□ 0.61
TNFSF9P41273 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.86■□□□□ 0.61
TNFSF9P41273 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.86■□□□□ 0.61
TNFSF9P41273 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.86■□□□□ 0.61
TNFSF9P41273 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.86■□□□□ 0.61
TNFSF9P41273 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TNFSF9P41273 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
TNFSF9P41273 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TNFSF9P41273 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNFSF9P41273 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNFSF9P41273 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TNFSF9P41273 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNFSF9P41273 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TNFSF9P41273 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.86■□□□□ 0.61
TNFSF9P41273 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TNFSF9P41273 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNFSF9P41273 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TNFSF9P41273 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TNFSF9P41273 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.85■□□□□ 0.61
TNFSF9P41273 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.85■□□□□ 0.61
TNFSF9P41273 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TNFSF9P41273 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.85■□□□□ 0.61
TNFSF9P41273 ELK2BP-201ENST00000415014 1224 ntBASIC18.85■□□□□ 0.61
TNFSF9P41273 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.85■□□□□ 0.61
TNFSF9P41273 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.85■□□□□ 0.61
TNFSF9P41273 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.85■□□□□ 0.61
TNFSF9P41273 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.85■□□□□ 0.61
TNFSF9P41273 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.85■□□□□ 0.61
TNFSF9P41273 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.85■□□□□ 0.61
TNFSF9P41273 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TNFSF9P41273 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNFSF9P41273 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TNFSF9P41273 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.85■□□□□ 0.61
TNFSF9P41273 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TNFSF9P41273 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFSF9P41273 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFSF9P41273 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.84■□□□□ 0.61
TNFSF9P41273 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TNFSF9P41273 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.84■□□□□ 0.61
TNFSF9P41273 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFSF9P41273 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.84■□□□□ 0.61
TNFSF9P41273 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms