Protein–RNA interactions for Protein: P29374

ARID4A, AT-rich interactive domain-containing protein 4A, humanhuman

Predicted RBP Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID4AP29374 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ARID4AP29374 PMS2P7-201ENST00000506558 1336 ntBASIC21.03■□□□□ 0.96
ARID4AP29374 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
ARID4AP29374 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ARID4AP29374 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC21.02■□□□□ 0.96
ARID4AP29374 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC21.02■□□□□ 0.96
ARID4AP29374 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ARID4AP29374 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ARID4AP29374 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ARID4AP29374 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC21.02■□□□□ 0.96
ARID4AP29374 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC21.02■□□□□ 0.96
ARID4AP29374 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ARID4AP29374 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
ARID4AP29374 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
ARID4AP29374 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC21.02■□□□□ 0.96
ARID4AP29374 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC21.02■□□□□ 0.96
ARID4AP29374 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC21.02■□□□□ 0.96
ARID4AP29374 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC21.02■□□□□ 0.96
ARID4AP29374 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
ARID4AP29374 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ARID4AP29374 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ARID4AP29374 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC21.02■□□□□ 0.96
ARID4AP29374 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ARID4AP29374 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
ARID4AP29374 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARID4AP29374 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC21.01■□□□□ 0.95
ARID4AP29374 AC020763.4-201ENST00000623414 4170 ntBASIC21.01■□□□□ 0.95
ARID4AP29374 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARID4AP29374 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARID4AP29374 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
ARID4AP29374 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ARID4AP29374 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC21.01■□□□□ 0.95
ARID4AP29374 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
ARID4AP29374 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARID4AP29374 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARID4AP29374 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARID4AP29374 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARID4AP29374 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
ARID4AP29374 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
ARID4AP29374 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
ARID4AP29374 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
ARID4AP29374 MIR940-201ENST00000401276 94 ntBASIC21.01■□□□□ 0.95
ARID4AP29374 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC21.01■□□□□ 0.95
ARID4AP29374 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
ARID4AP29374 AC007967.2-201ENST00000432613 625 ntBASIC21.01■□□□□ 0.95
ARID4AP29374 PRSS29P-201ENST00000440800 595 ntBASIC21.01■□□□□ 0.95
ARID4AP29374 KRT18P3-201ENST00000451602 1288 ntBASIC21.01■□□□□ 0.95
ARID4AP29374 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
ARID4AP29374 HS6ST1P1-201ENST00000481504 1234 ntBASIC21.01■□□□□ 0.95
ARID4AP29374 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC21.01■□□□□ 0.95
ARID4AP29374 NMU-202ENST00000505262 693 ntTSL 3 BASIC21.01■□□□□ 0.95
ARID4AP29374 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC21.01■□□□□ 0.95
ARID4AP29374 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
ARID4AP29374 TCAP-202ENST00000578283 583 ntTSL 5 BASIC21.01■□□□□ 0.95
ARID4AP29374 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
ARID4AP29374 AC004790.2-201ENST00000623588 572 ntBASIC21.01■□□□□ 0.95
ARID4AP29374 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC21.01■□□□□ 0.95
ARID4AP29374 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC21.01■□□□□ 0.95
ARID4AP29374 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARID4AP29374 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
ARID4AP29374 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
ARID4AP29374 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ARID4AP29374 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARID4AP29374 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
ARID4AP29374 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ARID4AP29374 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARID4AP29374 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARID4AP29374 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ARID4AP29374 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ARID4AP29374 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARID4AP29374 AC068880.1-201ENST00000507289 2297 ntBASIC21.01■□□□□ 0.95
ARID4AP29374 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARID4AP29374 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ARID4AP29374 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ARID4AP29374 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC21■□□□□ 0.95
ARID4AP29374 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ARID4AP29374 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ARID4AP29374 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ARID4AP29374 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC21■□□□□ 0.95
ARID4AP29374 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ARID4AP29374 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC21■□□□□ 0.95
ARID4AP29374 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC21■□□□□ 0.95
ARID4AP29374 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC21■□□□□ 0.95
ARID4AP29374 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC21■□□□□ 0.95
ARID4AP29374 OR7E47P-204ENST00000575924 449 ntBASIC21■□□□□ 0.95
ARID4AP29374 AC064836.3-201ENST00000607928 673 ntBASIC21■□□□□ 0.95
ARID4AP29374 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC21■□□□□ 0.95
ARID4AP29374 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC21■□□□□ 0.95
ARID4AP29374 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ARID4AP29374 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21■□□□□ 0.95
ARID4AP29374 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ARID4AP29374 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC21■□□□□ 0.95
ARID4AP29374 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ARID4AP29374 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ARID4AP29374 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ARID4AP29374 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.99■□□□□ 0.95
ARID4AP29374 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ARID4AP29374 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
ARID4AP29374 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ARID4AP29374 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms