Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
XPAP23025 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
XPAP23025 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
XPAP23025 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
XPAP23025 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
XPAP23025 MRPL3P1-201ENST00000400109 1033 ntBASIC17.64■□□□□ 0.41
XPAP23025 AL020989.1-201ENST00000422979 469 ntBASIC17.64■□□□□ 0.41
XPAP23025 SLC25A6P5-201ENST00000435663 894 ntBASIC17.64■□□□□ 0.41
XPAP23025 STK19B-204ENST00000512515 211 ntBASIC17.64■□□□□ 0.41
XPAP23025 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
XPAP23025 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
XPAP23025 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.64■□□□□ 0.41
XPAP23025 AP001005.1-201ENST00000571755 1248 ntBASIC17.64■□□□□ 0.41
XPAP23025 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
XPAP23025 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.64■□□□□ 0.41
XPAP23025 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
XPAP23025 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.64■□□□□ 0.41
XPAP23025 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.64■□□□□ 0.41
XPAP23025 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
XPAP23025 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
XPAP23025 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
XPAP23025 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
XPAP23025 AC079776.2-201ENST00000641154 1609 ntBASIC17.64■□□□□ 0.41
XPAP23025 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
XPAP23025 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
XPAP23025 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
XPAP23025 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
XPAP23025 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
XPAP23025 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
XPAP23025 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
XPAP23025 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.63■□□□□ 0.41
XPAP23025 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
XPAP23025 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
XPAP23025 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.63■□□□□ 0.41
XPAP23025 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
XPAP23025 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
XPAP23025 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
XPAP23025 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
XPAP23025 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
XPAP23025 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
XPAP23025 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
XPAP23025 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.63■□□□□ 0.41
XPAP23025 SLC25A6P4-201ENST00000586535 553 ntBASIC17.63■□□□□ 0.41
XPAP23025 AC019129.2-201ENST00000609837 1235 ntBASIC17.63■□□□□ 0.41
XPAP23025 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
XPAP23025 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
XPAP23025 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
XPAP23025 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
XPAP23025 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.63■□□□□ 0.41
XPAP23025 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
XPAP23025 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.63■□□□□ 0.41
XPAP23025 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.63■□□□□ 0.41
XPAP23025 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
XPAP23025 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
XPAP23025 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
XPAP23025 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
XPAP23025 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
XPAP23025 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.62■□□□□ 0.41
XPAP23025 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
XPAP23025 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.62■□□□□ 0.41
XPAP23025 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
XPAP23025 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.62■□□□□ 0.41
XPAP23025 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
XPAP23025 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
XPAP23025 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.62■□□□□ 0.41
XPAP23025 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
XPAP23025 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.62■□□□□ 0.41
XPAP23025 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
XPAP23025 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
XPAP23025 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
XPAP23025 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
XPAP23025 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.62■□□□□ 0.41
XPAP23025 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
XPAP23025 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
XPAP23025 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
XPAP23025 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
XPAP23025 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
XPAP23025 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
XPAP23025 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.62■□□□□ 0.41
XPAP23025 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.62■□□□□ 0.41
XPAP23025 AC021087.4-201ENST00000563761 564 ntBASIC17.62■□□□□ 0.41
XPAP23025 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.62■□□□□ 0.41
XPAP23025 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.62■□□□□ 0.41
XPAP23025 MTDHP4-201ENST00000600287 670 ntBASIC17.62■□□□□ 0.41
XPAP23025 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
XPAP23025 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
XPAP23025 AL022326.1-202ENST00000641533 845 ntBASIC17.62■□□□□ 0.41
XPAP23025 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.62■□□□□ 0.41
XPAP23025 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
XPAP23025 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.62■□□□□ 0.41
XPAP23025 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
XPAP23025 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
XPAP23025 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
XPAP23025 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
XPAP23025 AC012317.2-201ENST00000623305 2251 ntBASIC17.61■□□□□ 0.41
XPAP23025 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
XPAP23025 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
XPAP23025 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.61■□□□□ 0.41
XPAP23025 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
XPAP23025 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms