Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.03■□□□□ -0
CCL1P22362 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.03■□□□□ -0
CCL1P22362 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.03■□□□□ -0
CCL1P22362 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCL1P22362 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
CCL1P22362 AC005915.1-201ENST00000624912 2018 ntBASIC15.03■□□□□ -0
CCL1P22362 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.03■□□□□ -0
CCL1P22362 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CCL1P22362 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCL1P22362 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CCL1P22362 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCL1P22362 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CCL1P22362 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCL1P22362 AC009336.1-201ENST00000608941 1553 ntBASIC15.02■□□□□ -0
CCL1P22362 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCL1P22362 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCL1P22362 OR6D1P-202ENST00000641007 5290 ntBASIC15.02■□□□□ -0
CCL1P22362 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.02■□□□□ -0
CCL1P22362 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCL1P22362 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CCL1P22362 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCL1P22362 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCL1P22362 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.02■□□□□ -0
CCL1P22362 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.02■□□□□ -0
CCL1P22362 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCL1P22362 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
CCL1P22362 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCL1P22362 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCL1P22362 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.02■□□□□ -0
CCL1P22362 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.02■□□□□ -0
CCL1P22362 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
CCL1P22362 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCL1P22362 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CCL1P22362 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCL1P22362 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.02■□□□□ -0
CCL1P22362 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.02■□□□□ -0
CCL1P22362 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.02■□□□□ -0
CCL1P22362 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCL1P22362 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCL1P22362 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.02■□□□□ -0
CCL1P22362 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.02■□□□□ -0
CCL1P22362 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCL1P22362 AC011467.2-201ENST00000598425 242 ntBASIC15.02■□□□□ -0
CCL1P22362 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CCL1P22362 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.02■□□□□ -0
CCL1P22362 AL121956.5-201ENST00000625261 221 ntBASIC15.02■□□□□ -0
CCL1P22362 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CCL1P22362 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCL1P22362 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.02□□□□□ -0.01
CCL1P22362 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
CCL1P22362 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
CCL1P22362 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCL1P22362 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCL1P22362 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
CCL1P22362 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.02□□□□□ -0.01
CCL1P22362 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCL1P22362 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCL1P22362 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.01□□□□□ -0.01
CCL1P22362 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCL1P22362 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCL1P22362 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCL1P22362 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CCL1P22362 AC003669.1-201ENST00000334569 611 ntBASIC15.01□□□□□ -0.01
CCL1P22362 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
CCL1P22362 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCL1P22362 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC15.01□□□□□ -0.01
CCL1P22362 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC15.01□□□□□ -0.01
CCL1P22362 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.01□□□□□ -0.01
CCL1P22362 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CCL1P22362 VENTXP7-201ENST00000475503 772 ntBASIC15.01□□□□□ -0.01
CCL1P22362 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.01□□□□□ -0.01
CCL1P22362 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.01□□□□□ -0.01
CCL1P22362 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.01□□□□□ -0.01
CCL1P22362 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.01□□□□□ -0.01
CCL1P22362 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCL1P22362 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.01□□□□□ -0.01
CCL1P22362 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CCL1P22362 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.01□□□□□ -0.01
CCL1P22362 AD001527.2-201ENST00000622994 785 ntBASIC15.01□□□□□ -0.01
CCL1P22362 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.01□□□□□ -0.01
CCL1P22362 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.01□□□□□ -0.01
CCL1P22362 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
CCL1P22362 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CCL1P22362 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCL1P22362 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.01□□□□□ -0.01
CCL1P22362 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCL1P22362 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CCL1P22362 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCL1P22362 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCL1P22362 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.01□□□□□ -0.01
CCL1P22362 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCL1P22362 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCL1P22362 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCL1P22362 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCL1P22362 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCL1P22362 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCL1P22362 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15□□□□□ -0.01
CCL1P22362 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCL1P22362 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CCL1P22362 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms