Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.84■□□□□ 0.29
CAPN3P20807 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CAPN3P20807 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CAPN3P20807 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CAPN3P20807 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CAPN3P20807 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CAPN3P20807 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CAPN3P20807 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CAPN3P20807 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CAPN3P20807 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CAPN3P20807 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CAPN3P20807 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CAPN3P20807 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CAPN3P20807 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CAPN3P20807 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CAPN3P20807 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CAPN3P20807 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.84■□□□□ 0.29
CAPN3P20807 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.84■□□□□ 0.29
CAPN3P20807 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.84■□□□□ 0.29
CAPN3P20807 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.84■□□□□ 0.29
CAPN3P20807 AC024563.2-201ENST00000603282 481 ntBASIC16.84■□□□□ 0.29
CAPN3P20807 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CAPN3P20807 LINC01311-201ENST00000565162 1445 ntBASIC16.84■□□□□ 0.29
CAPN3P20807 KRT89P-201ENST00000620027 1478 ntBASIC16.84■□□□□ 0.29
CAPN3P20807 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.84■□□□□ 0.29
CAPN3P20807 BX276092.7-203ENST00000637198 1536 ntBASIC16.84■□□□□ 0.29
CAPN3P20807 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.84■□□□□ 0.29
CAPN3P20807 AC046185.3-201ENST00000623228 1824 ntBASIC16.84■□□□□ 0.29
CAPN3P20807 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CAPN3P20807 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CAPN3P20807 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CAPN3P20807 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CAPN3P20807 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CAPN3P20807 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CAPN3P20807 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.84■□□□□ 0.29
CAPN3P20807 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CAPN3P20807 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CAPN3P20807 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CAPN3P20807 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
CAPN3P20807 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CAPN3P20807 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
CAPN3P20807 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CAPN3P20807 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CAPN3P20807 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CAPN3P20807 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CAPN3P20807 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CAPN3P20807 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CAPN3P20807 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CAPN3P20807 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CAPN3P20807 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CAPN3P20807 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.83■□□□□ 0.28
CAPN3P20807 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.83■□□□□ 0.28
CAPN3P20807 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CAPN3P20807 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CAPN3P20807 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CAPN3P20807 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CAPN3P20807 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CAPN3P20807 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CAPN3P20807 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CAPN3P20807 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.83■□□□□ 0.28
CAPN3P20807 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CAPN3P20807 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.83■□□□□ 0.28
CAPN3P20807 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.83■□□□□ 0.28
CAPN3P20807 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.83■□□□□ 0.28
CAPN3P20807 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CAPN3P20807 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CAPN3P20807 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CAPN3P20807 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
CAPN3P20807 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CAPN3P20807 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CAPN3P20807 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CAPN3P20807 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.83■□□□□ 0.28
CAPN3P20807 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CAPN3P20807 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.82■□□□□ 0.28
CAPN3P20807 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CAPN3P20807 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CAPN3P20807 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CAPN3P20807 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.82■□□□□ 0.28
CAPN3P20807 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CAPN3P20807 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CAPN3P20807 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CAPN3P20807 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CAPN3P20807 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CAPN3P20807 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CAPN3P20807 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CAPN3P20807 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.82■□□□□ 0.28
CAPN3P20807 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.82■□□□□ 0.28
CAPN3P20807 AC005332.1-201ENST00000577698 1310 ntBASIC16.82■□□□□ 0.28
CAPN3P20807 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CAPN3P20807 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CAPN3P20807 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.82■□□□□ 0.28
CAPN3P20807 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CAPN3P20807 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
CAPN3P20807 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CAPN3P20807 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CAPN3P20807 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CAPN3P20807 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CAPN3P20807 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CAPN3P20807 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CAPN3P20807 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms