Protein–RNA interactions for Protein: P20783

NTF3, Neurotrophin-3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTF3P20783 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NTF3P20783 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NTF3P20783 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
NTF3P20783 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC13.35□□□□□ -0.27
NTF3P20783 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NTF3P20783 AL355312.1-201ENST00000407115 2176 ntBASIC13.35□□□□□ -0.27
NTF3P20783 BOC-212ENST00000485230 2173 ntTSL 2 BASIC13.35□□□□□ -0.27
NTF3P20783 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NTF3P20783 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
NTF3P20783 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NTF3P20783 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC13.35□□□□□ -0.27
NTF3P20783 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NTF3P20783 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NTF3P20783 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
NTF3P20783 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.35□□□□□ -0.27
NTF3P20783 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC13.35□□□□□ -0.27
NTF3P20783 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NTF3P20783 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
NTF3P20783 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NTF3P20783 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
NTF3P20783 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
NTF3P20783 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NTF3P20783 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NTF3P20783 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NTF3P20783 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
NTF3P20783 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NTF3P20783 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC13.34□□□□□ -0.27
NTF3P20783 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC13.34□□□□□ -0.27
NTF3P20783 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NTF3P20783 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
NTF3P20783 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
NTF3P20783 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NTF3P20783 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NTF3P20783 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.34□□□□□ -0.27
NTF3P20783 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NTF3P20783 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC13.34□□□□□ -0.27
NTF3P20783 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
NTF3P20783 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
NTF3P20783 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NTF3P20783 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NTF3P20783 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC13.34□□□□□ -0.27
NTF3P20783 MIR564-202ENST00000385049 94 ntBASIC13.34□□□□□ -0.27
NTF3P20783 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC13.34□□□□□ -0.27
NTF3P20783 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
NTF3P20783 AC091390.4-202ENST00000476426 537 ntBASIC13.34□□□□□ -0.27
NTF3P20783 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC13.34□□□□□ -0.27
NTF3P20783 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC13.34□□□□□ -0.27
NTF3P20783 WT1-AS_3.1-201ENST00000613262 234 ntBASIC13.34□□□□□ -0.27
NTF3P20783 AL445675.2-201ENST00000620291 557 ntBASIC13.34□□□□□ -0.27
NTF3P20783 INO80E-214ENST00000620599 515 ntTSL 2 BASIC13.34□□□□□ -0.27
NTF3P20783 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NTF3P20783 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
NTF3P20783 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
NTF3P20783 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NTF3P20783 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NTF3P20783 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NTF3P20783 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
NTF3P20783 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
NTF3P20783 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.34□□□□□ -0.27
NTF3P20783 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.34□□□□□ -0.27
NTF3P20783 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NTF3P20783 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NTF3P20783 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
NTF3P20783 AL603756.1-201ENST00000606511 2163 ntBASIC13.34□□□□□ -0.27
NTF3P20783 OS9-205ENST00000413095 1660 ntTSL 2 BASIC13.34□□□□□ -0.27
NTF3P20783 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
NTF3P20783 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
NTF3P20783 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NTF3P20783 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
NTF3P20783 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
NTF3P20783 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.27
NTF3P20783 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
NTF3P20783 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC13.33□□□□□ -0.27
NTF3P20783 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
NTF3P20783 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NTF3P20783 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
NTF3P20783 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NTF3P20783 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NTF3P20783 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC13.33□□□□□ -0.28
NTF3P20783 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC13.33□□□□□ -0.28
NTF3P20783 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.33□□□□□ -0.28
NTF3P20783 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NTF3P20783 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
NTF3P20783 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NTF3P20783 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
NTF3P20783 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
NTF3P20783 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
NTF3P20783 AC034236.2-201ENST00000606662 1610 ntBASIC13.33□□□□□ -0.28
NTF3P20783 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NTF3P20783 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
NTF3P20783 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC13.33□□□□□ -0.28
NTF3P20783 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC13.33□□□□□ -0.28
NTF3P20783 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NTF3P20783 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
NTF3P20783 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC13.33□□□□□ -0.28
NTF3P20783 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC13.33□□□□□ -0.28
NTF3P20783 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC13.33□□□□□ -0.28
NTF3P20783 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NTF3P20783 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC13.33□□□□□ -0.28
NTF3P20783 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms