Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
UBCP0CG48 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC15.36■□□□□ 0.05
UBCP0CG48 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
UBCP0CG48 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBCP0CG48 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBCP0CG48 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
UBCP0CG48 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.36■□□□□ 0.05
UBCP0CG48 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
UBCP0CG48 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.36■□□□□ 0.05
UBCP0CG48 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBCP0CG48 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBCP0CG48 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
UBCP0CG48 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
UBCP0CG48 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UBCP0CG48 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
UBCP0CG48 MST1L-201ENST00000442552 2185 ntBASIC15.35■□□□□ 0.05
UBCP0CG48 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
UBCP0CG48 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
UBCP0CG48 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UBCP0CG48 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UBCP0CG48 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.35■□□□□ 0.05
UBCP0CG48 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UBCP0CG48 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UBCP0CG48 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UBCP0CG48 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UBCP0CG48 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.35■□□□□ 0.05
UBCP0CG48 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UBCP0CG48 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UBCP0CG48 SPDYE15P-201ENST00000424157 909 ntBASIC15.35■□□□□ 0.05
UBCP0CG48 AC002558.1-201ENST00000488906 803 ntBASIC15.35■□□□□ 0.05
UBCP0CG48 AP003733.1-201ENST00000491725 852 ntBASIC15.35■□□□□ 0.05
UBCP0CG48 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
UBCP0CG48 DET1-205ENST00000558413 583 ntTSL 4 BASIC15.35■□□□□ 0.05
UBCP0CG48 ZNF444P1-201ENST00000559497 298 ntBASIC15.35■□□□□ 0.05
UBCP0CG48 AL441883.1-201ENST00000566170 1045 ntBASIC15.35■□□□□ 0.05
UBCP0CG48 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC15.35■□□□□ 0.05
UBCP0CG48 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.35■□□□□ 0.05
UBCP0CG48 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.35■□□□□ 0.05
UBCP0CG48 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UBCP0CG48 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UBCP0CG48 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UBCP0CG48 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
UBCP0CG48 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
UBCP0CG48 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.35■□□□□ 0.05
UBCP0CG48 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
UBCP0CG48 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.35■□□□□ 0.05
UBCP0CG48 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
UBCP0CG48 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
UBCP0CG48 PKD1P5-201ENST00000532415 10291 ntBASIC15.35■□□□□ 0.05
UBCP0CG48 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
UBCP0CG48 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.35■□□□□ 0.05
UBCP0CG48 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
UBCP0CG48 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UBCP0CG48 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
UBCP0CG48 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.35■□□□□ 0.05
UBCP0CG48 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.35■□□□□ 0.05
UBCP0CG48 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
UBCP0CG48 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.35■□□□□ 0.05
UBCP0CG48 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBCP0CG48 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBCP0CG48 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.34■□□□□ 0.05
UBCP0CG48 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
UBCP0CG48 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
UBCP0CG48 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBCP0CG48 CICP6-201ENST00000457191 2729 ntBASIC15.34■□□□□ 0.05
UBCP0CG48 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.34■□□□□ 0.05
UBCP0CG48 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBCP0CG48 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
UBCP0CG48 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
UBCP0CG48 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
UBCP0CG48 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
UBCP0CG48 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
UBCP0CG48 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.34■□□□□ 0.05
UBCP0CG48 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC15.34■□□□□ 0.05
UBCP0CG48 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.34■□□□□ 0.05
UBCP0CG48 GPR32P1-201ENST00000601788 811 ntBASIC15.34■□□□□ 0.05
UBCP0CG48 AL139327.4-201ENST00000612362 153 ntBASIC15.34■□□□□ 0.05
UBCP0CG48 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
UBCP0CG48 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
UBCP0CG48 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.34■□□□□ 0.05
UBCP0CG48 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBCP0CG48 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.34■□□□□ 0.05
UBCP0CG48 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
UBCP0CG48 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
UBCP0CG48 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBCP0CG48 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBCP0CG48 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.34■□□□□ 0.05
UBCP0CG48 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
UBCP0CG48 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.34■□□□□ 0.05
UBCP0CG48 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
UBCP0CG48 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBCP0CG48 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
UBCP0CG48 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBCP0CG48 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBCP0CG48 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBCP0CG48 AL353692.3-201ENST00000407031 1396 ntBASIC15.34■□□□□ 0.05
UBCP0CG48 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBCP0CG48 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBCP0CG48 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBCP0CG48 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms