Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
SP9P0CG40 AC017083.2-201ENST00000608069 979 ntBASIC17.03■□□□□ 0.32
SP9P0CG40 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SP9P0CG40 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.03■□□□□ 0.32
SP9P0CG40 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SP9P0CG40 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SP9P0CG40 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SP9P0CG40 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SP9P0CG40 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.03■□□□□ 0.32
SP9P0CG40 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SP9P0CG40 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SP9P0CG40 AC005332.7-201ENST00000614046 2005 ntBASIC17.03■□□□□ 0.32
SP9P0CG40 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SP9P0CG40 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SP9P0CG40 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SP9P0CG40 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SP9P0CG40 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SP9P0CG40 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SP9P0CG40 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SP9P0CG40 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SP9P0CG40 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.02■□□□□ 0.32
SP9P0CG40 RPS2P32-201ENST00000439199 892 ntBASIC17.02■□□□□ 0.32
SP9P0CG40 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.02■□□□□ 0.32
SP9P0CG40 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SP9P0CG40 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.02■□□□□ 0.32
SP9P0CG40 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.02■□□□□ 0.32
SP9P0CG40 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.02■□□□□ 0.32
SP9P0CG40 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SP9P0CG40 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.02■□□□□ 0.32
SP9P0CG40 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.02■□□□□ 0.32
SP9P0CG40 AC008267.7-201ENST00000624570 1194 ntBASIC17.02■□□□□ 0.32
SP9P0CG40 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
SP9P0CG40 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SP9P0CG40 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SP9P0CG40 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.02■□□□□ 0.31
SP9P0CG40 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SP9P0CG40 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
SP9P0CG40 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.02■□□□□ 0.31
SP9P0CG40 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SP9P0CG40 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SP9P0CG40 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SP9P0CG40 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SP9P0CG40 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SP9P0CG40 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.01■□□□□ 0.31
SP9P0CG40 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SP9P0CG40 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SP9P0CG40 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SP9P0CG40 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SP9P0CG40 AC138969.3-201ENST00000546612 1459 ntBASIC17.01■□□□□ 0.31
SP9P0CG40 AC138932.2-201ENST00000548268 1459 ntBASIC17.01■□□□□ 0.31
SP9P0CG40 AC126755.4-201ENST00000549796 1459 ntBASIC17.01■□□□□ 0.31
SP9P0CG40 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.01■□□□□ 0.31
SP9P0CG40 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SP9P0CG40 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SP9P0CG40 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SP9P0CG40 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
SP9P0CG40 MIR346-201ENST00000362234 95 ntBASIC17.01■□□□□ 0.31
SP9P0CG40 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.01■□□□□ 0.31
SP9P0CG40 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.01■□□□□ 0.31
SP9P0CG40 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.01■□□□□ 0.31
SP9P0CG40 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.01■□□□□ 0.31
SP9P0CG40 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.01■□□□□ 0.31
SP9P0CG40 GIMAP3P-201ENST00000495150 836 ntBASIC17.01■□□□□ 0.31
SP9P0CG40 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.01■□□□□ 0.31
SP9P0CG40 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.01■□□□□ 0.31
SP9P0CG40 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SP9P0CG40 AC027307.2-201ENST00000591252 911 ntBASIC17.01■□□□□ 0.31
SP9P0CG40 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.01■□□□□ 0.31
SP9P0CG40 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SP9P0CG40 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SP9P0CG40 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.01■□□□□ 0.31
SP9P0CG40 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
SP9P0CG40 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SP9P0CG40 AL096828.2-201ENST00000567259 1965 ntBASIC17■□□□□ 0.31
SP9P0CG40 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17■□□□□ 0.31
SP9P0CG40 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17■□□□□ 0.31
SP9P0CG40 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SP9P0CG40 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SP9P0CG40 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SP9P0CG40 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17■□□□□ 0.31
SP9P0CG40 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SP9P0CG40 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17■□□□□ 0.31
SP9P0CG40 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17■□□□□ 0.31
SP9P0CG40 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SP9P0CG40 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
SP9P0CG40 WASH6P-202ENST00000359512 1437 ntBASIC17■□□□□ 0.31
SP9P0CG40 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
SP9P0CG40 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SP9P0CG40 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SP9P0CG40 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17■□□□□ 0.31
SP9P0CG40 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17■□□□□ 0.31
SP9P0CG40 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17■□□□□ 0.31
SP9P0CG40 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17■□□□□ 0.31
SP9P0CG40 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17■□□□□ 0.31
SP9P0CG40 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17■□□□□ 0.31
SP9P0CG40 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17■□□□□ 0.31
SP9P0CG40 AC109635.5-201ENST00000533593 962 ntBASIC17■□□□□ 0.31
SP9P0CG40 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17■□□□□ 0.31
SP9P0CG40 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SP9P0CG40 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms