Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CD48P09326 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.1■□□□□ 0.49
CD48P09326 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.1■□□□□ 0.49
CD48P09326 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CD48P09326 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CD48P09326 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD48P09326 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
CD48P09326 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CD48P09326 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD48P09326 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.09■□□□□ 0.49
CD48P09326 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CD48P09326 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CD48P09326 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CD48P09326 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CD48P09326 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD48P09326 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD48P09326 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CD48P09326 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD48P09326 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CD48P09326 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.09■□□□□ 0.49
CD48P09326 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD48P09326 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD48P09326 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CD48P09326 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD48P09326 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CD48P09326 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD48P09326 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD48P09326 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CD48P09326 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CD48P09326 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
CD48P09326 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD48P09326 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
CD48P09326 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD48P09326 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.09■□□□□ 0.49
CD48P09326 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD48P09326 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.09■□□□□ 0.49
CD48P09326 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CD48P09326 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD48P09326 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.09■□□□□ 0.49
CD48P09326 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.09■□□□□ 0.49
CD48P09326 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.09■□□□□ 0.49
CD48P09326 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.09■□□□□ 0.49
CD48P09326 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.09■□□□□ 0.49
CD48P09326 AD001527.2-201ENST00000622994 785 ntBASIC18.09■□□□□ 0.49
CD48P09326 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD48P09326 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.09■□□□□ 0.49
CD48P09326 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.09■□□□□ 0.49
CD48P09326 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.09■□□□□ 0.49
CD48P09326 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD48P09326 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CD48P09326 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CD48P09326 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
CD48P09326 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD48P09326 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD48P09326 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.09■□□□□ 0.49
CD48P09326 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.09■□□□□ 0.49
CD48P09326 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CD48P09326 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CD48P09326 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CD48P09326 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CD48P09326 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CD48P09326 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CD48P09326 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CD48P09326 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CD48P09326 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CD48P09326 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CD48P09326 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CD48P09326 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CD48P09326 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CD48P09326 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CD48P09326 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CD48P09326 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CD48P09326 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CD48P09326 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CD48P09326 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CD48P09326 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CD48P09326 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CD48P09326 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CD48P09326 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.08■□□□□ 0.48
CD48P09326 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CD48P09326 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.08■□□□□ 0.48
CD48P09326 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.08■□□□□ 0.48
CD48P09326 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.08■□□□□ 0.48
CD48P09326 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.08■□□□□ 0.48
CD48P09326 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CD48P09326 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.08■□□□□ 0.48
CD48P09326 AC111152.3-201ENST00000569699 673 ntBASIC18.08■□□□□ 0.48
CD48P09326 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
CD48P09326 AC092329.2-201ENST00000598402 547 ntBASIC18.08■□□□□ 0.48
CD48P09326 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.08■□□□□ 0.48
CD48P09326 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.08■□□□□ 0.48
CD48P09326 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CD48P09326 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CD48P09326 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CD48P09326 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CD48P09326 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
CD48P09326 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CD48P09326 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CD48P09326 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
CD48P09326 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms