Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DPB1P04440 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DPB1P04440 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DPB1P04440 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DPB1P04440 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HLA-DPB1P04440 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DPB1P04440 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DPB1P04440 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DPB1P04440 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DPB1P04440 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DPB1P04440 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.74■□□□□ 0.11
HLA-DPB1P04440 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
HLA-DPB1P04440 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DPB1P04440 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.74■□□□□ 0.11
HLA-DPB1P04440 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
HLA-DPB1P04440 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DPB1P04440 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DPB1P04440 PCDH8P1-201ENST00000428983 2773 ntBASIC15.74■□□□□ 0.11
HLA-DPB1P04440 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DPB1P04440 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DPB1P04440 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.74■□□□□ 0.11
HLA-DPB1P04440 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
HLA-DPB1P04440 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DPB1P04440 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DPB1P04440 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DPB1P04440 AP000523.1-201ENST00000398242 1049 ntBASIC15.74■□□□□ 0.11
HLA-DPB1P04440 SEC1P-202ENST00000473944 940 ntBASIC15.74■□□□□ 0.11
HLA-DPB1P04440 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.74■□□□□ 0.11
HLA-DPB1P04440 COX11P1-201ENST00000489116 835 ntBASIC15.74■□□□□ 0.11
HLA-DPB1P04440 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.74■□□□□ 0.11
HLA-DPB1P04440 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.74■□□□□ 0.11
HLA-DPB1P04440 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
HLA-DPB1P04440 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.74■□□□□ 0.11
HLA-DPB1P04440 GCSHP2-201ENST00000560971 527 ntBASIC15.74■□□□□ 0.11
HLA-DPB1P04440 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
HLA-DPB1P04440 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.74■□□□□ 0.11
HLA-DPB1P04440 AC016396.2-201ENST00000562575 1417 ntBASIC15.74■□□□□ 0.11
HLA-DPB1P04440 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.74■□□□□ 0.11
HLA-DPB1P04440 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
HLA-DPB1P04440 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
HLA-DPB1P04440 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
HLA-DPB1P04440 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DPB1P04440 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
HLA-DPB1P04440 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
HLA-DPB1P04440 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DPB1P04440 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.73■□□□□ 0.11
HLA-DPB1P04440 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DPB1P04440 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DPB1P04440 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.73■□□□□ 0.11
HLA-DPB1P04440 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DPB1P04440 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DPB1P04440 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DPB1P04440 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
HLA-DPB1P04440 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.73■□□□□ 0.11
HLA-DPB1P04440 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
HLA-DPB1P04440 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DPB1P04440 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.73■□□□□ 0.11
HLA-DPB1P04440 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DPB1P04440 RCN1P1-201ENST00000400413 996 ntBASIC15.73■□□□□ 0.11
HLA-DPB1P04440 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DPB1P04440 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DPB1P04440 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DPB1P04440 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
HLA-DPB1P04440 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC15.73■□□□□ 0.11
HLA-DPB1P04440 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DPB1P04440 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DPB1P04440 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DPB1P04440 BX664615.1-201ENST00000443558 458 ntBASIC15.73■□□□□ 0.11
HLA-DPB1P04440 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.73■□□□□ 0.11
HLA-DPB1P04440 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
HLA-DPB1P04440 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DPB1P04440 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DPB1P04440 KRT18P21-201ENST00000515767 1272 ntBASIC15.73■□□□□ 0.11
HLA-DPB1P04440 RN7SL850P-201ENST00000579959 291 ntBASIC15.73■□□□□ 0.11
HLA-DPB1P04440 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DPB1P04440 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
HLA-DPB1P04440 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC15.73■□□□□ 0.11
HLA-DPB1P04440 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
HLA-DPB1P04440 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
HLA-DPB1P04440 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
HLA-DPB1P04440 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.73■□□□□ 0.11
HLA-DPB1P04440 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DPB1P04440 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.73■□□□□ 0.11
HLA-DPB1P04440 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DPB1P04440 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DPB1P04440 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DPB1P04440 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DPB1P04440 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.72■□□□□ 0.11
HLA-DPB1P04440 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DPB1P04440 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DPB1P04440 REXO1L11P-201ENST00000620964 1927 ntBASIC15.72■□□□□ 0.11
HLA-DPB1P04440 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.72■□□□□ 0.11
HLA-DPB1P04440 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DPB1P04440 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DPB1P04440 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.72■□□□□ 0.11
HLA-DPB1P04440 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DPB1P04440 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DPB1P04440 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DPB1P04440 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.72■□□□□ 0.11
HLA-DPB1P04440 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms