Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.29■□□□□ 0.52
LMNAP02545 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.29■□□□□ 0.52
LMNAP02545 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LMNAP02545 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
LMNAP02545 AL109659.2-201ENST00000606809 1674 ntBASIC18.28■□□□□ 0.52
LMNAP02545 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
LMNAP02545 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LMNAP02545 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LMNAP02545 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LMNAP02545 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LMNAP02545 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LMNAP02545 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.28■□□□□ 0.52
LMNAP02545 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.28■□□□□ 0.52
LMNAP02545 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.28■□□□□ 0.52
LMNAP02545 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LMNAP02545 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
LMNAP02545 SNHG9-202ENST00000564014 471 ntBASIC18.28■□□□□ 0.52
LMNAP02545 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.28■□□□□ 0.52
LMNAP02545 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
LMNAP02545 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LMNAP02545 ZNF815P-204ENST00000434898 1737 ntBASIC18.28■□□□□ 0.52
LMNAP02545 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LMNAP02545 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LMNAP02545 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LMNAP02545 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LMNAP02545 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LMNAP02545 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LMNAP02545 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
LMNAP02545 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LMNAP02545 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LMNAP02545 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.27■□□□□ 0.52
LMNAP02545 KRT89P-201ENST00000620027 1478 ntBASIC18.27■□□□□ 0.52
LMNAP02545 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LMNAP02545 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LMNAP02545 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LMNAP02545 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LMNAP02545 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.27■□□□□ 0.52
LMNAP02545 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LMNAP02545 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LMNAP02545 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LMNAP02545 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.27■□□□□ 0.52
LMNAP02545 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LMNAP02545 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LMNAP02545 RCN1P2-201ENST00000398357 915 ntBASIC18.27■□□□□ 0.52
LMNAP02545 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.27■□□□□ 0.52
LMNAP02545 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LMNAP02545 RPS2P1-201ENST00000434010 821 ntBASIC18.27■□□□□ 0.52
LMNAP02545 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LMNAP02545 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.27■□□□□ 0.52
LMNAP02545 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.27■□□□□ 0.52
LMNAP02545 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LMNAP02545 AC021087.4-201ENST00000563761 564 ntBASIC18.27■□□□□ 0.52
LMNAP02545 AC011467.4-201ENST00000594891 528 ntBASIC18.27■□□□□ 0.52
LMNAP02545 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.27■□□□□ 0.52
LMNAP02545 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.27■□□□□ 0.52
LMNAP02545 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.27■□□□□ 0.52
LMNAP02545 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.51
LMNAP02545 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
LMNAP02545 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.27■□□□□ 0.51
LMNAP02545 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
LMNAP02545 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
LMNAP02545 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LMNAP02545 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.27■□□□□ 0.51
LMNAP02545 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
LMNAP02545 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.27■□□□□ 0.51
LMNAP02545 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LMNAP02545 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
LMNAP02545 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LMNAP02545 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LMNAP02545 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LMNAP02545 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
LMNAP02545 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LMNAP02545 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LMNAP02545 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LMNAP02545 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LMNAP02545 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LMNAP02545 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
LMNAP02545 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LMNAP02545 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LMNAP02545 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LMNAP02545 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.26■□□□□ 0.51
LMNAP02545 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.26■□□□□ 0.51
LMNAP02545 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.26■□□□□ 0.51
LMNAP02545 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.26■□□□□ 0.51
LMNAP02545 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.26■□□□□ 0.51
LMNAP02545 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LMNAP02545 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.26■□□□□ 0.51
LMNAP02545 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.26■□□□□ 0.51
LMNAP02545 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LMNAP02545 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
LMNAP02545 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.26■□□□□ 0.51
LMNAP02545 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LMNAP02545 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.26■□□□□ 0.51
LMNAP02545 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
LMNAP02545 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.26■□□□□ 0.51
LMNAP02545 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.26■□□□□ 0.51
LMNAP02545 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LMNAP02545 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LMNAP02545 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
LMNAP02545 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms