Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TOP3BO95985 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.93■□□□□ 0.46
TOP3BO95985 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TOP3BO95985 AC093909.1-201ENST00000504731 1122 ntBASIC17.93■□□□□ 0.46
TOP3BO95985 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.93■□□□□ 0.46
TOP3BO95985 AC010327.4-202ENST00000591484 748 ntBASIC17.93■□□□□ 0.46
TOP3BO95985 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.93■□□□□ 0.46
TOP3BO95985 AC124864.1-201ENST00000623408 392 ntBASIC17.93■□□□□ 0.46
TOP3BO95985 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.93■□□□□ 0.46
TOP3BO95985 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TOP3BO95985 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TOP3BO95985 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.93■□□□□ 0.46
TOP3BO95985 AC084018.2-201ENST00000613093 2607 ntBASIC17.93■□□□□ 0.46
TOP3BO95985 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TOP3BO95985 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TOP3BO95985 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TOP3BO95985 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
TOP3BO95985 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.93■□□□□ 0.46
TOP3BO95985 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TOP3BO95985 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
TOP3BO95985 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TOP3BO95985 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TOP3BO95985 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TOP3BO95985 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TOP3BO95985 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TOP3BO95985 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
TOP3BO95985 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TOP3BO95985 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TOP3BO95985 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.92■□□□□ 0.46
TOP3BO95985 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.92■□□□□ 0.46
TOP3BO95985 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TOP3BO95985 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.92■□□□□ 0.46
TOP3BO95985 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
TOP3BO95985 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.92■□□□□ 0.46
TOP3BO95985 AP001160.2-201ENST00000596071 487 ntBASIC17.92■□□□□ 0.46
TOP3BO95985 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TOP3BO95985 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TOP3BO95985 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.92■□□□□ 0.46
TOP3BO95985 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.92■□□□□ 0.46
TOP3BO95985 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TOP3BO95985 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.92■□□□□ 0.46
TOP3BO95985 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TOP3BO95985 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
TOP3BO95985 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TOP3BO95985 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TOP3BO95985 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TOP3BO95985 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TOP3BO95985 ZNF259P1-201ENST00000407656 1365 ntBASIC17.91■□□□□ 0.46
TOP3BO95985 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.91■□□□□ 0.46
TOP3BO95985 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TOP3BO95985 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TOP3BO95985 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TOP3BO95985 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TOP3BO95985 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TOP3BO95985 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TOP3BO95985 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
TOP3BO95985 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TOP3BO95985 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TOP3BO95985 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TOP3BO95985 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.91■□□□□ 0.46
TOP3BO95985 AC098831.1-202ENST00000438821 336 ntBASIC17.91■□□□□ 0.46
TOP3BO95985 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.91■□□□□ 0.46
TOP3BO95985 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.91■□□□□ 0.46
TOP3BO95985 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.91■□□□□ 0.46
TOP3BO95985 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.91■□□□□ 0.46
TOP3BO95985 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.91■□□□□ 0.46
TOP3BO95985 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.91■□□□□ 0.46
TOP3BO95985 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.91■□□□□ 0.46
TOP3BO95985 AL592071.1-201ENST00000611956 408 ntBASIC17.91■□□□□ 0.46
TOP3BO95985 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.91■□□□□ 0.46
TOP3BO95985 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TOP3BO95985 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
TOP3BO95985 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TOP3BO95985 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TOP3BO95985 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TOP3BO95985 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TOP3BO95985 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
TOP3BO95985 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TOP3BO95985 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TOP3BO95985 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.91■□□□□ 0.46
TOP3BO95985 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.91■□□□□ 0.46
TOP3BO95985 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TOP3BO95985 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TOP3BO95985 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TOP3BO95985 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TOP3BO95985 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TOP3BO95985 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.9■□□□□ 0.46
TOP3BO95985 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.9■□□□□ 0.46
TOP3BO95985 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TOP3BO95985 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TOP3BO95985 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TOP3BO95985 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TOP3BO95985 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TOP3BO95985 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TOP3BO95985 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TOP3BO95985 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
TOP3BO95985 AC139887.3-201ENST00000568585 713 ntBASIC17.9■□□□□ 0.46
TOP3BO95985 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.9■□□□□ 0.46
TOP3BO95985 AC010240.3-201ENST00000607688 395 ntBASIC17.9■□□□□ 0.46
TOP3BO95985 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms