Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
GGPS1O95749 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.58■□□□□ 0.72
GGPS1O95749 AL353135.1-201ENST00000606729 504 ntBASIC19.58■□□□□ 0.72
GGPS1O95749 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.58■□□□□ 0.72
GGPS1O95749 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
GGPS1O95749 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
GGPS1O95749 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GGPS1O95749 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GGPS1O95749 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
GGPS1O95749 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GGPS1O95749 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.58■□□□□ 0.72
GGPS1O95749 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.72
GGPS1O95749 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
GGPS1O95749 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
GGPS1O95749 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GGPS1O95749 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GGPS1O95749 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GGPS1O95749 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
GGPS1O95749 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
GGPS1O95749 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.57■□□□□ 0.72
GGPS1O95749 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.57■□□□□ 0.72
GGPS1O95749 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GGPS1O95749 GPR89P-201ENST00000407924 1495 ntBASIC19.57■□□□□ 0.72
GGPS1O95749 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GGPS1O95749 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.57■□□□□ 0.72
GGPS1O95749 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.57■□□□□ 0.72
GGPS1O95749 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
GGPS1O95749 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.57■□□□□ 0.72
GGPS1O95749 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.57■□□□□ 0.72
GGPS1O95749 RPSAP43-201ENST00000402237 625 ntBASIC19.57■□□□□ 0.72
GGPS1O95749 GPX1P2-201ENST00000429271 606 ntBASIC19.57■□□□□ 0.72
GGPS1O95749 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.57■□□□□ 0.72
GGPS1O95749 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.57■□□□□ 0.72
GGPS1O95749 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.57■□□□□ 0.72
GGPS1O95749 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.57■□□□□ 0.72
GGPS1O95749 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.57■□□□□ 0.72
GGPS1O95749 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.57■□□□□ 0.72
GGPS1O95749 AC002347.1-201ENST00000569543 541 ntBASIC19.57■□□□□ 0.72
GGPS1O95749 AC055717.3-201ENST00000622967 595 ntBASIC19.57■□□□□ 0.72
GGPS1O95749 AC004790.2-201ENST00000623588 572 ntBASIC19.57■□□□□ 0.72
GGPS1O95749 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
GGPS1O95749 AL805961.1-202ENST00000641562 540 ntBASIC19.57■□□□□ 0.72
GGPS1O95749 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GGPS1O95749 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.57■□□□□ 0.72
GGPS1O95749 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
GGPS1O95749 PCDHB18P-201ENST00000524813 2368 ntBASIC19.57■□□□□ 0.72
GGPS1O95749 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.57■□□□□ 0.72
GGPS1O95749 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
GGPS1O95749 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GGPS1O95749 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
GGPS1O95749 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GGPS1O95749 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
GGPS1O95749 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.56■□□□□ 0.72
GGPS1O95749 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GGPS1O95749 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
GGPS1O95749 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GGPS1O95749 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
GGPS1O95749 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
GGPS1O95749 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
GGPS1O95749 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.56■□□□□ 0.72
GGPS1O95749 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GGPS1O95749 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GGPS1O95749 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GGPS1O95749 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.56■□□□□ 0.72
GGPS1O95749 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
GGPS1O95749 PTCHD3P3-201ENST00000403073 906 ntBASIC19.56■□□□□ 0.72
GGPS1O95749 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GGPS1O95749 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.56■□□□□ 0.72
GGPS1O95749 AC004832.2-201ENST00000426397 482 ntBASIC19.56■□□□□ 0.72
GGPS1O95749 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.56■□□□□ 0.72
GGPS1O95749 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.56■□□□□ 0.72
GGPS1O95749 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.56■□□□□ 0.72
GGPS1O95749 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
GGPS1O95749 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.56■□□□□ 0.72
GGPS1O95749 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.56■□□□□ 0.72
GGPS1O95749 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
GGPS1O95749 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GGPS1O95749 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.56■□□□□ 0.72
GGPS1O95749 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GGPS1O95749 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.56■□□□□ 0.72
GGPS1O95749 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GGPS1O95749 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GGPS1O95749 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
GGPS1O95749 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
GGPS1O95749 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.56■□□□□ 0.72
GGPS1O95749 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GGPS1O95749 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.56■□□□□ 0.72
GGPS1O95749 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.56■□□□□ 0.72
GGPS1O95749 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
GGPS1O95749 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GGPS1O95749 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
GGPS1O95749 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.55■□□□□ 0.72
GGPS1O95749 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.55■□□□□ 0.72
GGPS1O95749 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
GGPS1O95749 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.55■□□□□ 0.72
GGPS1O95749 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
GGPS1O95749 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GGPS1O95749 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GGPS1O95749 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GGPS1O95749 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms