Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.8■□□□□ 0.28
PRAMEF4O60810 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEF4O60810 AC111152.3-201ENST00000569699 673 ntBASIC16.8■□□□□ 0.28
PRAMEF4O60810 MIR5100-201ENST00000579544 119 ntBASIC16.8■□□□□ 0.28
PRAMEF4O60810 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.8■□□□□ 0.28
PRAMEF4O60810 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEF4O60810 AC073592.5-201ENST00000624854 528 ntBASIC16.8■□□□□ 0.28
PRAMEF4O60810 AP000867.4-201ENST00000641616 219 ntBASIC16.8■□□□□ 0.28
PRAMEF4O60810 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEF4O60810 AC060834.1-201ENST00000443027 2032 ntBASIC16.8■□□□□ 0.28
PRAMEF4O60810 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.8■□□□□ 0.28
PRAMEF4O60810 AC009336.1-201ENST00000608941 1553 ntBASIC16.8■□□□□ 0.28
PRAMEF4O60810 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEF4O60810 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEF4O60810 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PRAMEF4O60810 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEF4O60810 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PRAMEF4O60810 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.8■□□□□ 0.28
PRAMEF4O60810 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PRAMEF4O60810 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEF4O60810 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEF4O60810 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEF4O60810 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
PRAMEF4O60810 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEF4O60810 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEF4O60810 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEF4O60810 AC148477.5-201ENST00000625164 1645 ntBASIC16.79■□□□□ 0.28
PRAMEF4O60810 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
PRAMEF4O60810 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
PRAMEF4O60810 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
PRAMEF4O60810 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEF4O60810 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.79■□□□□ 0.28
PRAMEF4O60810 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PRAMEF4O60810 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.79■□□□□ 0.28
PRAMEF4O60810 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.79■□□□□ 0.28
PRAMEF4O60810 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PRAMEF4O60810 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.79■□□□□ 0.28
PRAMEF4O60810 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEF4O60810 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PRAMEF4O60810 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.79■□□□□ 0.28
PRAMEF4O60810 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.79■□□□□ 0.28
PRAMEF4O60810 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEF4O60810 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEF4O60810 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEF4O60810 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEF4O60810 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEF4O60810 AC093525.9-201ENST00000624961 1746 ntBASIC16.79■□□□□ 0.28
PRAMEF4O60810 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.78■□□□□ 0.28
PRAMEF4O60810 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.78■□□□□ 0.28
PRAMEF4O60810 AL135999.2-201ENST00000622438 1686 ntBASIC16.78■□□□□ 0.28
PRAMEF4O60810 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
PRAMEF4O60810 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRAMEF4O60810 AC092053.1-201ENST00000605787 1936 ntBASIC16.78■□□□□ 0.28
PRAMEF4O60810 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PRAMEF4O60810 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRAMEF4O60810 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.78■□□□□ 0.28
PRAMEF4O60810 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRAMEF4O60810 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
PRAMEF4O60810 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRAMEF4O60810 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
PRAMEF4O60810 NUS1P2-201ENST00000417358 873 ntBASIC16.78■□□□□ 0.28
PRAMEF4O60810 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.78■□□□□ 0.28
PRAMEF4O60810 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.78■□□□□ 0.28
PRAMEF4O60810 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.78■□□□□ 0.28
PRAMEF4O60810 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.78■□□□□ 0.28
PRAMEF4O60810 AC138894.3-201ENST00000603787 634 ntBASIC16.78■□□□□ 0.28
PRAMEF4O60810 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.78■□□□□ 0.28
PRAMEF4O60810 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.78■□□□□ 0.28
PRAMEF4O60810 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PRAMEF4O60810 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PRAMEF4O60810 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRAMEF4O60810 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRAMEF4O60810 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PRAMEF4O60810 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.78■□□□□ 0.28
PRAMEF4O60810 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PRAMEF4O60810 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.78■□□□□ 0.28
PRAMEF4O60810 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
PRAMEF4O60810 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRAMEF4O60810 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRAMEF4O60810 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRAMEF4O60810 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRAMEF4O60810 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.77■□□□□ 0.28
PRAMEF4O60810 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.77■□□□□ 0.28
PRAMEF4O60810 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PRAMEF4O60810 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PRAMEF4O60810 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
PRAMEF4O60810 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.77■□□□□ 0.28
PRAMEF4O60810 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRAMEF4O60810 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRAMEF4O60810 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.77■□□□□ 0.28
PRAMEF4O60810 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRAMEF4O60810 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
PRAMEF4O60810 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.77■□□□□ 0.28
PRAMEF4O60810 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRAMEF4O60810 STK19B-204ENST00000512515 211 ntBASIC16.77■□□□□ 0.28
PRAMEF4O60810 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.77■□□□□ 0.28
PRAMEF4O60810 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.77■□□□□ 0.28
PRAMEF4O60810 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PRAMEF4O60810 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRAMEF4O60810 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms