Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HCN1O60741 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.37■□□□□ 0.21
HCN1O60741 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
HCN1O60741 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.37■□□□□ 0.21
HCN1O60741 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HCN1O60741 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
HCN1O60741 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.37■□□□□ 0.21
HCN1O60741 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.37■□□□□ 0.21
HCN1O60741 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.37■□□□□ 0.21
HCN1O60741 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HCN1O60741 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.37■□□□□ 0.21
HCN1O60741 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HCN1O60741 AC099336.1-202ENST00000602961 463 ntBASIC16.37■□□□□ 0.21
HCN1O60741 IFNL4P1-201ENST00000607083 540 ntBASIC16.37■□□□□ 0.21
HCN1O60741 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HCN1O60741 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
HCN1O60741 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.37■□□□□ 0.21
HCN1O60741 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.37■□□□□ 0.21
HCN1O60741 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
HCN1O60741 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HCN1O60741 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HCN1O60741 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HCN1O60741 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
HCN1O60741 AC080080.1-201ENST00000625121 2420 ntBASIC16.37■□□□□ 0.21
HCN1O60741 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HCN1O60741 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
HCN1O60741 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HCN1O60741 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HCN1O60741 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HCN1O60741 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
HCN1O60741 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HCN1O60741 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HCN1O60741 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
HCN1O60741 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
HCN1O60741 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
HCN1O60741 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.36■□□□□ 0.21
HCN1O60741 NSUN5P1-202ENST00000421140 1535 ntBASIC16.36■□□□□ 0.21
HCN1O60741 NSUN5P2-203ENST00000457352 1529 ntBASIC16.36■□□□□ 0.21
HCN1O60741 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
HCN1O60741 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HCN1O60741 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HCN1O60741 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HCN1O60741 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HCN1O60741 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HCN1O60741 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
HCN1O60741 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HCN1O60741 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.36■□□□□ 0.21
HCN1O60741 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HCN1O60741 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.36■□□□□ 0.21
HCN1O60741 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HCN1O60741 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.36■□□□□ 0.21
HCN1O60741 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.36■□□□□ 0.21
HCN1O60741 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HCN1O60741 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.36■□□□□ 0.21
HCN1O60741 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HCN1O60741 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HCN1O60741 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HCN1O60741 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.36■□□□□ 0.21
HCN1O60741 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HCN1O60741 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HCN1O60741 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HCN1O60741 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HCN1O60741 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HCN1O60741 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
HCN1O60741 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HCN1O60741 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
HCN1O60741 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
HCN1O60741 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HCN1O60741 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HCN1O60741 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HCN1O60741 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HCN1O60741 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
HCN1O60741 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HCN1O60741 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.35■□□□□ 0.21
HCN1O60741 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HCN1O60741 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HCN1O60741 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HCN1O60741 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
HCN1O60741 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.35■□□□□ 0.21
HCN1O60741 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HCN1O60741 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
HCN1O60741 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.35■□□□□ 0.21
HCN1O60741 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HCN1O60741 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HCN1O60741 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HCN1O60741 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
HCN1O60741 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.35■□□□□ 0.21
HCN1O60741 POM121L3P-201ENST00000419331 1163 ntBASIC16.35■□□□□ 0.21
HCN1O60741 KRT16P4-201ENST00000453883 522 ntBASIC16.35■□□□□ 0.21
HCN1O60741 MINOS1P3-201ENST00000457048 203 ntBASIC16.35■□□□□ 0.21
HCN1O60741 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.35■□□□□ 0.21
HCN1O60741 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.35■□□□□ 0.21
HCN1O60741 UNC93B7-201ENST00000509439 705 ntBASIC16.35■□□□□ 0.21
HCN1O60741 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HCN1O60741 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.35■□□□□ 0.21
HCN1O60741 AL732292.2-201ENST00000609649 430 ntBASIC16.35■□□□□ 0.21
HCN1O60741 AC009154.2-201ENST00000621177 724 ntBASIC16.35■□□□□ 0.21
HCN1O60741 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HCN1O60741 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HCN1O60741 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms