Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 AC134684.3-201ENST00000641758 218 ntBASIC16.88■□□□□ 0.29
SLC28A2O43868 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC28A2O43868 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC28A2O43868 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC28A2O43868 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
SLC28A2O43868 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC28A2O43868 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC28A2O43868 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
SLC28A2O43868 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.88■□□□□ 0.29
SLC28A2O43868 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.87■□□□□ 0.29
SLC28A2O43868 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC28A2O43868 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.87■□□□□ 0.29
SLC28A2O43868 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.87■□□□□ 0.29
SLC28A2O43868 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
SLC28A2O43868 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SLC28A2O43868 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLC28A2O43868 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLC28A2O43868 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC28A2O43868 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC28A2O43868 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SLC28A2O43868 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC28A2O43868 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.87■□□□□ 0.29
SLC28A2O43868 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
SLC28A2O43868 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC28A2O43868 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.87■□□□□ 0.29
SLC28A2O43868 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.87■□□□□ 0.29
SLC28A2O43868 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.87■□□□□ 0.29
SLC28A2O43868 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.87■□□□□ 0.29
SLC28A2O43868 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SLC28A2O43868 AC112482.1-201ENST00000492080 688 ntBASIC16.87■□□□□ 0.29
SLC28A2O43868 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.87■□□□□ 0.29
SLC28A2O43868 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.87■□□□□ 0.29
SLC28A2O43868 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.87■□□□□ 0.29
SLC28A2O43868 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLC28A2O43868 GPR32P1-201ENST00000601788 811 ntBASIC16.87■□□□□ 0.29
SLC28A2O43868 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLC28A2O43868 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SLC28A2O43868 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC28A2O43868 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC28A2O43868 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC28A2O43868 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.87■□□□□ 0.29
SLC28A2O43868 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC28A2O43868 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLC28A2O43868 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SLC28A2O43868 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLC28A2O43868 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SLC28A2O43868 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.87■□□□□ 0.29
SLC28A2O43868 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC28A2O43868 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC28A2O43868 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.86■□□□□ 0.29
SLC28A2O43868 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC28A2O43868 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
SLC28A2O43868 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC28A2O43868 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC28A2O43868 AC006116.8-202ENST00000587620 1550 ntBASIC16.86■□□□□ 0.29
SLC28A2O43868 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC28A2O43868 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC28A2O43868 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SLC28A2O43868 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.86■□□□□ 0.29
SLC28A2O43868 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.86■□□□□ 0.29
SLC28A2O43868 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.86■□□□□ 0.29
SLC28A2O43868 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC28A2O43868 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC28A2O43868 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
SLC28A2O43868 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SLC28A2O43868 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC28A2O43868 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.86■□□□□ 0.29
SLC28A2O43868 POM121L3P-201ENST00000419331 1163 ntBASIC16.86■□□□□ 0.29
SLC28A2O43868 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.86■□□□□ 0.29
SLC28A2O43868 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.86■□□□□ 0.29
SLC28A2O43868 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.86■□□□□ 0.29
SLC28A2O43868 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.86■□□□□ 0.29
SLC28A2O43868 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.86■□□□□ 0.29
SLC28A2O43868 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.86■□□□□ 0.29
SLC28A2O43868 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.86■□□□□ 0.29
SLC28A2O43868 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SLC28A2O43868 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SLC28A2O43868 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.86■□□□□ 0.29
SLC28A2O43868 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SLC28A2O43868 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC28A2O43868 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC28A2O43868 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC28A2O43868 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SLC28A2O43868 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC28A2O43868 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
SLC28A2O43868 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC28A2O43868 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC28A2O43868 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC28A2O43868 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.86■□□□□ 0.29
SLC28A2O43868 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC28A2O43868 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC28A2O43868 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SLC28A2O43868 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC28A2O43868 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC28A2O43868 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC28A2O43868 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC28A2O43868 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC28A2O43868 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
SLC28A2O43868 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
SLC28A2O43868 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms