Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.63■□□□□ 0.41
SMAD6O43541 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.63■□□□□ 0.41
SMAD6O43541 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SMAD6O43541 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SMAD6O43541 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMAD6O43541 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMAD6O43541 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.63■□□□□ 0.41
SMAD6O43541 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMAD6O43541 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMAD6O43541 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.63■□□□□ 0.41
SMAD6O43541 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SMAD6O43541 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.63■□□□□ 0.41
SMAD6O43541 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMAD6O43541 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SMAD6O43541 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SMAD6O43541 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.62■□□□□ 0.41
SMAD6O43541 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.62■□□□□ 0.41
SMAD6O43541 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
SMAD6O43541 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMAD6O43541 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMAD6O43541 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMAD6O43541 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMAD6O43541 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMAD6O43541 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SMAD6O43541 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.62■□□□□ 0.41
SMAD6O43541 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.62■□□□□ 0.41
SMAD6O43541 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SMAD6O43541 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.62■□□□□ 0.41
SMAD6O43541 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SMAD6O43541 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.62■□□□□ 0.41
SMAD6O43541 UNC93B6-202ENST00000528242 690 ntBASIC17.62■□□□□ 0.41
SMAD6O43541 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
SMAD6O43541 AL139424.1-201ENST00000607572 797 ntBASIC17.62■□□□□ 0.41
SMAD6O43541 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMAD6O43541 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
SMAD6O43541 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMAD6O43541 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMAD6O43541 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SMAD6O43541 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMAD6O43541 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SMAD6O43541 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMAD6O43541 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMAD6O43541 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
SMAD6O43541 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMAD6O43541 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.61■□□□□ 0.41
SMAD6O43541 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMAD6O43541 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SMAD6O43541 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMAD6O43541 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMAD6O43541 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMAD6O43541 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMAD6O43541 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.61■□□□□ 0.41
SMAD6O43541 AC136632.2-201ENST00000512891 861 ntBASIC17.61■□□□□ 0.41
SMAD6O43541 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMAD6O43541 AC106730.1-201ENST00000566722 1090 ntBASIC17.61■□□□□ 0.41
SMAD6O43541 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.61■□□□□ 0.41
SMAD6O43541 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.61■□□□□ 0.41
SMAD6O43541 AL353135.1-201ENST00000606729 504 ntBASIC17.61■□□□□ 0.41
SMAD6O43541 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMAD6O43541 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMAD6O43541 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.61■□□□□ 0.41
SMAD6O43541 AC104109.2-201ENST00000602919 1418 ntBASIC17.61■□□□□ 0.41
SMAD6O43541 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMAD6O43541 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMAD6O43541 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMAD6O43541 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SMAD6O43541 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMAD6O43541 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.61■□□□□ 0.41
SMAD6O43541 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMAD6O43541 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.61■□□□□ 0.41
SMAD6O43541 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.6■□□□□ 0.41
SMAD6O43541 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMAD6O43541 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMAD6O43541 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
SMAD6O43541 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
SMAD6O43541 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMAD6O43541 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
SMAD6O43541 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SMAD6O43541 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SMAD6O43541 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SMAD6O43541 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMAD6O43541 MIR574-201ENST00000385209 96 ntBASIC17.6■□□□□ 0.41
SMAD6O43541 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.6■□□□□ 0.41
SMAD6O43541 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.6■□□□□ 0.41
SMAD6O43541 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.6■□□□□ 0.41
SMAD6O43541 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.6■□□□□ 0.41
SMAD6O43541 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.6■□□□□ 0.41
SMAD6O43541 AC145285.3-201ENST00000564603 959 ntBASIC17.6■□□□□ 0.41
SMAD6O43541 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SMAD6O43541 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SMAD6O43541 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMAD6O43541 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
SMAD6O43541 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SMAD6O43541 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SMAD6O43541 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SMAD6O43541 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.6■□□□□ 0.41
SMAD6O43541 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SMAD6O43541 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMAD6O43541 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SMAD6O43541 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms