Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HDAC3O15379 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HDAC3O15379 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HDAC3O15379 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.02■□□□□ 0.32
HDAC3O15379 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HDAC3O15379 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
HDAC3O15379 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.02■□□□□ 0.32
HDAC3O15379 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
HDAC3O15379 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
HDAC3O15379 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
HDAC3O15379 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HDAC3O15379 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
HDAC3O15379 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.02■□□□□ 0.32
HDAC3O15379 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HDAC3O15379 CROCCP1-201ENST00000426910 5675 ntBASIC17.02■□□□□ 0.32
HDAC3O15379 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.02■□□□□ 0.32
HDAC3O15379 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.02■□□□□ 0.32
HDAC3O15379 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HDAC3O15379 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
HDAC3O15379 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HDAC3O15379 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HDAC3O15379 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HDAC3O15379 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.02■□□□□ 0.32
HDAC3O15379 AC096633.1-201ENST00000422446 749 ntBASIC17.02■□□□□ 0.32
HDAC3O15379 KRT18P48-201ENST00000434763 852 ntBASIC17.02■□□□□ 0.32
HDAC3O15379 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.02■□□□□ 0.32
HDAC3O15379 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.02■□□□□ 0.32
HDAC3O15379 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.02■□□□□ 0.32
HDAC3O15379 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.02■□□□□ 0.32
HDAC3O15379 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.02■□□□□ 0.32
HDAC3O15379 AL136038.4-201ENST00000603606 1261 ntBASIC17.02■□□□□ 0.32
HDAC3O15379 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
HDAC3O15379 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HDAC3O15379 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
HDAC3O15379 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HDAC3O15379 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
HDAC3O15379 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
HDAC3O15379 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HDAC3O15379 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HDAC3O15379 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.02■□□□□ 0.31
HDAC3O15379 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
HDAC3O15379 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.02■□□□□ 0.31
HDAC3O15379 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
HDAC3O15379 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HDAC3O15379 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HDAC3O15379 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
HDAC3O15379 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HDAC3O15379 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HDAC3O15379 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.01■□□□□ 0.31
HDAC3O15379 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
HDAC3O15379 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.01■□□□□ 0.31
HDAC3O15379 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HDAC3O15379 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.01■□□□□ 0.31
HDAC3O15379 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
HDAC3O15379 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
HDAC3O15379 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.01■□□□□ 0.31
HDAC3O15379 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HDAC3O15379 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.01■□□□□ 0.31
HDAC3O15379 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HDAC3O15379 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HDAC3O15379 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HDAC3O15379 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.01■□□□□ 0.31
HDAC3O15379 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HDAC3O15379 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HDAC3O15379 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.01■□□□□ 0.31
HDAC3O15379 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HDAC3O15379 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
HDAC3O15379 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.01■□□□□ 0.31
HDAC3O15379 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.01■□□□□ 0.31
HDAC3O15379 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
HDAC3O15379 AC079602.3-201ENST00000623931 403 ntBASIC17.01■□□□□ 0.31
HDAC3O15379 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.01■□□□□ 0.31
HDAC3O15379 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HDAC3O15379 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
HDAC3O15379 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
HDAC3O15379 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HDAC3O15379 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HDAC3O15379 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.01■□□□□ 0.31
HDAC3O15379 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.01■□□□□ 0.31
HDAC3O15379 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HDAC3O15379 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17■□□□□ 0.31
HDAC3O15379 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17■□□□□ 0.31
HDAC3O15379 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17■□□□□ 0.31
HDAC3O15379 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HDAC3O15379 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17■□□□□ 0.31
HDAC3O15379 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
HDAC3O15379 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HDAC3O15379 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
HDAC3O15379 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
HDAC3O15379 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HDAC3O15379 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HDAC3O15379 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HDAC3O15379 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17■□□□□ 0.31
HDAC3O15379 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HDAC3O15379 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17■□□□□ 0.31
HDAC3O15379 SNORA78-201ENST00000459373 127 ntBASIC17■□□□□ 0.31
HDAC3O15379 RASA4DP-201ENST00000460726 1199 ntBASIC17■□□□□ 0.31
HDAC3O15379 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17■□□□□ 0.31
HDAC3O15379 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17■□□□□ 0.31
HDAC3O15379 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms