Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 MIR1224-201ENST00000408193 85 ntBASIC16.96■□□□□ 0.31
UBFD1O14562 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.96■□□□□ 0.31
UBFD1O14562 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.96■□□□□ 0.31
UBFD1O14562 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.96■□□□□ 0.31
UBFD1O14562 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.96■□□□□ 0.31
UBFD1O14562 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.96■□□□□ 0.31
UBFD1O14562 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
UBFD1O14562 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBFD1O14562 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.96■□□□□ 0.31
UBFD1O14562 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
UBFD1O14562 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
UBFD1O14562 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBFD1O14562 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
UBFD1O14562 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBFD1O14562 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
UBFD1O14562 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
UBFD1O14562 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBFD1O14562 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
UBFD1O14562 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
UBFD1O14562 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
UBFD1O14562 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.96■□□□□ 0.3
UBFD1O14562 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
UBFD1O14562 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
UBFD1O14562 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
UBFD1O14562 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
UBFD1O14562 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.96■□□□□ 0.3
UBFD1O14562 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.96■□□□□ 0.3
UBFD1O14562 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
UBFD1O14562 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBFD1O14562 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UBFD1O14562 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBFD1O14562 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBFD1O14562 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UBFD1O14562 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
UBFD1O14562 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.95■□□□□ 0.3
UBFD1O14562 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.95■□□□□ 0.3
UBFD1O14562 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
UBFD1O14562 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBFD1O14562 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBFD1O14562 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBFD1O14562 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBFD1O14562 AL049757.1-201ENST00000616842 1596 ntBASIC16.95■□□□□ 0.3
UBFD1O14562 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.95■□□□□ 0.3
UBFD1O14562 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBFD1O14562 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.95■□□□□ 0.3
UBFD1O14562 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBFD1O14562 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBFD1O14562 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.95■□□□□ 0.3
UBFD1O14562 AC092647.4-201ENST00000457211 535 ntBASIC16.95■□□□□ 0.3
UBFD1O14562 AC063952.2-201ENST00000498792 1227 ntBASIC16.95■□□□□ 0.3
UBFD1O14562 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UBFD1O14562 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.95■□□□□ 0.3
UBFD1O14562 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBFD1O14562 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UBFD1O14562 AC005336.2-201ENST00000593183 939 ntBASIC16.95■□□□□ 0.3
UBFD1O14562 LINC01023-201ENST00000606054 436 ntBASIC16.95■□□□□ 0.3
UBFD1O14562 AL353801.3-201ENST00000609898 542 ntBASIC16.95■□□□□ 0.3
UBFD1O14562 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.95■□□□□ 0.3
UBFD1O14562 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBFD1O14562 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.95■□□□□ 0.3
UBFD1O14562 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBFD1O14562 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UBFD1O14562 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.95■□□□□ 0.3
UBFD1O14562 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.94■□□□□ 0.3
UBFD1O14562 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBFD1O14562 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBFD1O14562 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
UBFD1O14562 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBFD1O14562 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBFD1O14562 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBFD1O14562 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBFD1O14562 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
UBFD1O14562 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBFD1O14562 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.94■□□□□ 0.3
UBFD1O14562 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBFD1O14562 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.94■□□□□ 0.3
UBFD1O14562 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
UBFD1O14562 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
UBFD1O14562 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBFD1O14562 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
UBFD1O14562 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.94■□□□□ 0.3
UBFD1O14562 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.94■□□□□ 0.3
UBFD1O14562 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.94■□□□□ 0.3
UBFD1O14562 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.94■□□□□ 0.3
UBFD1O14562 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.94■□□□□ 0.3
UBFD1O14562 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.94■□□□□ 0.3
UBFD1O14562 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UBFD1O14562 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.94■□□□□ 0.3
UBFD1O14562 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBFD1O14562 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.94■□□□□ 0.3
UBFD1O14562 AC092068.3-201ENST00000587894 2016 ntBASIC16.94■□□□□ 0.3
UBFD1O14562 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UBFD1O14562 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBFD1O14562 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
UBFD1O14562 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UBFD1O14562 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
UBFD1O14562 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
UBFD1O14562 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
UBFD1O14562 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBFD1O14562 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms