Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SDCBPO00560 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SDCBPO00560 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC14.9□□□□□ -0.02
SDCBPO00560 BX664615.1-201ENST00000443558 458 ntBASIC14.9□□□□□ -0.02
SDCBPO00560 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC14.9□□□□□ -0.02
SDCBPO00560 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC14.9□□□□□ -0.02
SDCBPO00560 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SDCBPO00560 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC14.9□□□□□ -0.02
SDCBPO00560 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC14.9□□□□□ -0.02
SDCBPO00560 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC14.9□□□□□ -0.02
SDCBPO00560 AL441883.1-201ENST00000566170 1045 ntBASIC14.9□□□□□ -0.02
SDCBPO00560 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SDCBPO00560 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
SDCBPO00560 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SDCBPO00560 AC012306.2-201ENST00000609350 630 ntBASIC14.9□□□□□ -0.02
SDCBPO00560 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SDCBPO00560 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SDCBPO00560 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SDCBPO00560 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SDCBPO00560 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SDCBPO00560 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SDCBPO00560 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.9□□□□□ -0.02
SDCBPO00560 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SDCBPO00560 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
SDCBPO00560 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SDCBPO00560 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SDCBPO00560 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SDCBPO00560 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.9□□□□□ -0.02
SDCBPO00560 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
SDCBPO00560 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
SDCBPO00560 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC14.9□□□□□ -0.02
SDCBPO00560 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SDCBPO00560 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.9□□□□□ -0.02
SDCBPO00560 PCDH8P1-201ENST00000428983 2773 ntBASIC14.9□□□□□ -0.02
SDCBPO00560 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
SDCBPO00560 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SDCBPO00560 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SDCBPO00560 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC14.89□□□□□ -0.03
SDCBPO00560 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.89□□□□□ -0.03
SDCBPO00560 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.89□□□□□ -0.03
SDCBPO00560 AC105020.1-201ENST00000435356 2205 ntBASIC14.89□□□□□ -0.03
SDCBPO00560 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.89□□□□□ -0.03
SDCBPO00560 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SDCBPO00560 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SDCBPO00560 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC14.89□□□□□ -0.03
SDCBPO00560 AC005521.1-201ENST00000393351 872 ntBASIC14.89□□□□□ -0.03
SDCBPO00560 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC14.89□□□□□ -0.03
SDCBPO00560 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SDCBPO00560 AC139887.4-201ENST00000607877 719 ntBASIC14.89□□□□□ -0.03
SDCBPO00560 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.89□□□□□ -0.03
SDCBPO00560 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC14.89□□□□□ -0.03
SDCBPO00560 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
SDCBPO00560 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
SDCBPO00560 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SDCBPO00560 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SDCBPO00560 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SDCBPO00560 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SDCBPO00560 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SDCBPO00560 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
SDCBPO00560 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SDCBPO00560 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.89□□□□□ -0.03
SDCBPO00560 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SDCBPO00560 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
SDCBPO00560 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SDCBPO00560 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SDCBPO00560 AC060834.1-201ENST00000443027 2032 ntBASIC14.88□□□□□ -0.03
SDCBPO00560 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SDCBPO00560 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SDCBPO00560 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SDCBPO00560 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SDCBPO00560 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.88□□□□□ -0.03
SDCBPO00560 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SDCBPO00560 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SDCBPO00560 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SDCBPO00560 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC14.88□□□□□ -0.03
SDCBPO00560 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.88□□□□□ -0.03
SDCBPO00560 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SDCBPO00560 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC14.88□□□□□ -0.03
SDCBPO00560 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SDCBPO00560 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC14.88□□□□□ -0.03
SDCBPO00560 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC14.88□□□□□ -0.03
SDCBPO00560 YBX1P2-201ENST00000489612 999 ntBASIC14.88□□□□□ -0.03
SDCBPO00560 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC14.88□□□□□ -0.03
SDCBPO00560 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SDCBPO00560 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
SDCBPO00560 AC024563.2-201ENST00000603282 481 ntBASIC14.88□□□□□ -0.03
SDCBPO00560 AL136038.4-201ENST00000603606 1261 ntBASIC14.88□□□□□ -0.03
SDCBPO00560 LINC01023-201ENST00000606054 436 ntBASIC14.88□□□□□ -0.03
SDCBPO00560 AC011558.1-201ENST00000623459 338 ntBASIC14.88□□□□□ -0.03
SDCBPO00560 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SDCBPO00560 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SDCBPO00560 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.88□□□□□ -0.03
SDCBPO00560 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SDCBPO00560 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SDCBPO00560 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SDCBPO00560 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.88□□□□□ -0.03
SDCBPO00560 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SDCBPO00560 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SDCBPO00560 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SDCBPO00560 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms