Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
UPK1AO00322 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
UPK1AO00322 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UPK1AO00322 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UPK1AO00322 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPK1AO00322 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UPK1AO00322 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPK1AO00322 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPK1AO00322 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPK1AO00322 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.57■□□□□ 0.24
UPK1AO00322 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPK1AO00322 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPK1AO00322 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
UPK1AO00322 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
UPK1AO00322 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UPK1AO00322 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPK1AO00322 BX276092.7-203ENST00000637198 1536 ntBASIC16.57■□□□□ 0.24
UPK1AO00322 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UPK1AO00322 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPK1AO00322 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.57■□□□□ 0.24
UPK1AO00322 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPK1AO00322 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPK1AO00322 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.57■□□□□ 0.24
UPK1AO00322 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPK1AO00322 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UPK1AO00322 KRT18P35-201ENST00000510488 1269 ntBASIC16.57■□□□□ 0.24
UPK1AO00322 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UPK1AO00322 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.57■□□□□ 0.24
UPK1AO00322 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UPK1AO00322 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UPK1AO00322 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UPK1AO00322 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UPK1AO00322 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPK1AO00322 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPK1AO00322 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.57■□□□□ 0.24
UPK1AO00322 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
UPK1AO00322 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UPK1AO00322 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UPK1AO00322 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
UPK1AO00322 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UPK1AO00322 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UPK1AO00322 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
UPK1AO00322 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UPK1AO00322 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.56■□□□□ 0.24
UPK1AO00322 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
UPK1AO00322 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.56■□□□□ 0.24
UPK1AO00322 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UPK1AO00322 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UPK1AO00322 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UPK1AO00322 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UPK1AO00322 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.56■□□□□ 0.24
UPK1AO00322 IER3-202ENST00000376377 1350 ntBASIC16.56■□□□□ 0.24
UPK1AO00322 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UPK1AO00322 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UPK1AO00322 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UPK1AO00322 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UPK1AO00322 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
UPK1AO00322 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UPK1AO00322 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
UPK1AO00322 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UPK1AO00322 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.56■□□□□ 0.24
UPK1AO00322 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.56■□□□□ 0.24
UPK1AO00322 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UPK1AO00322 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.56■□□□□ 0.24
UPK1AO00322 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.56■□□□□ 0.24
UPK1AO00322 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.56■□□□□ 0.24
UPK1AO00322 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
UPK1AO00322 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
UPK1AO00322 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.56■□□□□ 0.24
UPK1AO00322 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UPK1AO00322 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
UPK1AO00322 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
UPK1AO00322 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UPK1AO00322 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
UPK1AO00322 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.56■□□□□ 0.24
UPK1AO00322 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.56■□□□□ 0.24
UPK1AO00322 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
UPK1AO00322 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
UPK1AO00322 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UPK1AO00322 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UPK1AO00322 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
UPK1AO00322 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UPK1AO00322 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UPK1AO00322 AC010460.3-201ENST00000511359 1579 ntBASIC16.55■□□□□ 0.24
UPK1AO00322 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
UPK1AO00322 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
UPK1AO00322 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.55■□□□□ 0.24
UPK1AO00322 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
UPK1AO00322 DOC2GP-204ENST00000639052 2548 ntBASIC16.55■□□□□ 0.24
UPK1AO00322 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UPK1AO00322 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.55■□□□□ 0.24
UPK1AO00322 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
UPK1AO00322 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.55■□□□□ 0.24
UPK1AO00322 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UPK1AO00322 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
UPK1AO00322 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.55■□□□□ 0.24
UPK1AO00322 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
UPK1AO00322 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
UPK1AO00322 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UPK1AO00322 CHCHD2P8-201ENST00000429873 447 ntBASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms