Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3B1O00203 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3B1O00203 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
AP3B1O00203 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.67■□□□□ 0.42
AP3B1O00203 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3B1O00203 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
AP3B1O00203 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
AP3B1O00203 AL049757.1-201ENST00000616842 1596 ntBASIC17.66■□□□□ 0.42
AP3B1O00203 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3B1O00203 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
AP3B1O00203 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.66■□□□□ 0.42
AP3B1O00203 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
AP3B1O00203 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
AP3B1O00203 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
AP3B1O00203 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3B1O00203 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3B1O00203 AL845331.1-201ENST00000424978 1190 ntBASIC17.66■□□□□ 0.42
AP3B1O00203 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
AP3B1O00203 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.66■□□□□ 0.42
AP3B1O00203 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.66■□□□□ 0.42
AP3B1O00203 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.66■□□□□ 0.42
AP3B1O00203 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.66■□□□□ 0.42
AP3B1O00203 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3B1O00203 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3B1O00203 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.66■□□□□ 0.42
AP3B1O00203 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
AP3B1O00203 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
AP3B1O00203 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
AP3B1O00203 AC005332.1-201ENST00000577698 1310 ntBASIC17.66■□□□□ 0.42
AP3B1O00203 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.66■□□□□ 0.42
AP3B1O00203 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
AP3B1O00203 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3B1O00203 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3B1O00203 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.66■□□□□ 0.42
AP3B1O00203 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
AP3B1O00203 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3B1O00203 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.66■□□□□ 0.42
AP3B1O00203 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3B1O00203 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3B1O00203 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3B1O00203 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.65■□□□□ 0.42
AP3B1O00203 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.65■□□□□ 0.42
AP3B1O00203 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP3B1O00203 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP3B1O00203 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
AP3B1O00203 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
AP3B1O00203 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
AP3B1O00203 AL353593.2-201ENST00000602529 1483 ntBASIC17.65■□□□□ 0.42
AP3B1O00203 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
AP3B1O00203 AC093525.9-201ENST00000624961 1746 ntBASIC17.65■□□□□ 0.42
AP3B1O00203 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.65■□□□□ 0.42
AP3B1O00203 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP3B1O00203 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP3B1O00203 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP3B1O00203 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP3B1O00203 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.65■□□□□ 0.42
AP3B1O00203 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.65■□□□□ 0.42
AP3B1O00203 STK25P1-201ENST00000585406 838 ntBASIC17.65■□□□□ 0.42
AP3B1O00203 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
AP3B1O00203 NTF6B-201ENST00000591913 560 ntBASIC17.65■□□□□ 0.42
AP3B1O00203 AL590326.2-201ENST00000625139 305 ntBASIC17.65■□□□□ 0.42
AP3B1O00203 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
AP3B1O00203 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.65■□□□□ 0.42
AP3B1O00203 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP3B1O00203 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP3B1O00203 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP3B1O00203 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
AP3B1O00203 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.64■□□□□ 0.41
AP3B1O00203 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP3B1O00203 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.64■□□□□ 0.41
AP3B1O00203 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
AP3B1O00203 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
AP3B1O00203 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP3B1O00203 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP3B1O00203 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP3B1O00203 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
AP3B1O00203 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
AP3B1O00203 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP3B1O00203 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
AP3B1O00203 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.64■□□□□ 0.41
AP3B1O00203 FAM86EP-206ENST00000510506 987 ntBASIC17.64■□□□□ 0.41
AP3B1O00203 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.64■□□□□ 0.41
AP3B1O00203 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.64■□□□□ 0.41
AP3B1O00203 AC011467.2-201ENST00000598425 242 ntBASIC17.64■□□□□ 0.41
AP3B1O00203 Z69720.1-201ENST00000601483 472 ntBASIC17.64■□□□□ 0.41
AP3B1O00203 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
AP3B1O00203 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP3B1O00203 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
AP3B1O00203 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.64■□□□□ 0.41
AP3B1O00203 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.64■□□□□ 0.41
AP3B1O00203 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
AP3B1O00203 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
AP3B1O00203 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP3B1O00203 AD000864.1-201ENST00000624076 2295 ntBASIC17.64■□□□□ 0.41
AP3B1O00203 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP3B1O00203 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP3B1O00203 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.64■□□□□ 0.41
AP3B1O00203 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP3B1O00203 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
AP3B1O00203 LINC02012-201ENST00000608206 1725 ntBASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms