Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPA3F8WFD2 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPA3F8WFD2 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.95■□□□□ 0.14
NPIPA3F8WFD2 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.95■□□□□ 0.14
NPIPA3F8WFD2 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPA3F8WFD2 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.95■□□□□ 0.14
NPIPA3F8WFD2 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA3F8WFD2 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
NPIPA3F8WFD2 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
NPIPA3F8WFD2 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA3F8WFD2 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA3F8WFD2 HLA-J-201ENST00000462773 1622 ntBASIC15.94■□□□□ 0.14
NPIPA3F8WFD2 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA3F8WFD2 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA3F8WFD2 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
NPIPA3F8WFD2 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA3F8WFD2 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA3F8WFD2 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
NPIPA3F8WFD2 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.94■□□□□ 0.14
NPIPA3F8WFD2 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA3F8WFD2 AC096633.1-201ENST00000422446 749 ntBASIC15.94■□□□□ 0.14
NPIPA3F8WFD2 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA3F8WFD2 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.94■□□□□ 0.14
NPIPA3F8WFD2 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
NPIPA3F8WFD2 AC092910.1-201ENST00000482027 1129 ntBASIC15.94■□□□□ 0.14
NPIPA3F8WFD2 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.94■□□□□ 0.14
NPIPA3F8WFD2 KRT18P58-201ENST00000527480 1120 ntBASIC15.94■□□□□ 0.14
NPIPA3F8WFD2 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.94■□□□□ 0.14
NPIPA3F8WFD2 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA3F8WFD2 AC106730.1-201ENST00000566722 1090 ntBASIC15.94■□□□□ 0.14
NPIPA3F8WFD2 MTDHP4-201ENST00000600287 670 ntBASIC15.94■□□□□ 0.14
NPIPA3F8WFD2 GPALPP1-207ENST00000611650 899 ntBASIC15.94■□□□□ 0.14
NPIPA3F8WFD2 AP000867.4-201ENST00000641616 219 ntBASIC15.94■□□□□ 0.14
NPIPA3F8WFD2 ZNF259P1-201ENST00000407656 1365 ntBASIC15.94■□□□□ 0.14
NPIPA3F8WFD2 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA3F8WFD2 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
NPIPA3F8WFD2 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA3F8WFD2 AC008764.6-201ENST00000595909 2069 ntBASIC15.94■□□□□ 0.14
NPIPA3F8WFD2 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.94■□□□□ 0.14
NPIPA3F8WFD2 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA3F8WFD2 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
NPIPA3F8WFD2 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
NPIPA3F8WFD2 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
NPIPA3F8WFD2 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC15.94■□□□□ 0.14
NPIPA3F8WFD2 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.94■□□□□ 0.14
NPIPA3F8WFD2 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA3F8WFD2 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
NPIPA3F8WFD2 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA3F8WFD2 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA3F8WFD2 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA3F8WFD2 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NPIPA3F8WFD2 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NPIPA3F8WFD2 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
NPIPA3F8WFD2 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPIPA3F8WFD2 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
NPIPA3F8WFD2 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPIPA3F8WFD2 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
NPIPA3F8WFD2 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.93■□□□□ 0.14
NPIPA3F8WFD2 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPIPA3F8WFD2 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NPIPA3F8WFD2 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NPIPA3F8WFD2 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NPIPA3F8WFD2 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.93■□□□□ 0.14
NPIPA3F8WFD2 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
NPIPA3F8WFD2 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
NPIPA3F8WFD2 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.93■□□□□ 0.14
NPIPA3F8WFD2 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.93■□□□□ 0.14
NPIPA3F8WFD2 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.93■□□□□ 0.14
NPIPA3F8WFD2 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
NPIPA3F8WFD2 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPIPA3F8WFD2 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.93■□□□□ 0.14
NPIPA3F8WFD2 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.93■□□□□ 0.14
NPIPA3F8WFD2 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.93■□□□□ 0.14
NPIPA3F8WFD2 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.93■□□□□ 0.14
NPIPA3F8WFD2 AC025062.2-201ENST00000605477 670 ntBASIC15.93■□□□□ 0.14
NPIPA3F8WFD2 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPIPA3F8WFD2 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPIPA3F8WFD2 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPIPA3F8WFD2 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
NPIPA3F8WFD2 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPIPA3F8WFD2 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPIPA3F8WFD2 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPIPA3F8WFD2 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPIPA3F8WFD2 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPIPA3F8WFD2 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
NPIPA3F8WFD2 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPIPA3F8WFD2 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.93■□□□□ 0.14
NPIPA3F8WFD2 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPIPA3F8WFD2 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPIPA3F8WFD2 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.93■□□□□ 0.14
NPIPA3F8WFD2 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
NPIPA3F8WFD2 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPIPA3F8WFD2 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.92■□□□□ 0.14
NPIPA3F8WFD2 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPIPA3F8WFD2 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.92■□□□□ 0.14
NPIPA3F8WFD2 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPIPA3F8WFD2 NOC2LP2-201ENST00000407594 1944 ntBASIC15.92■□□□□ 0.14
NPIPA3F8WFD2 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.92■□□□□ 0.14
NPIPA3F8WFD2 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPIPA3F8WFD2 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms