Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 BX276092.5-203ENST00000456199 560 ntBASIC14.08□□□□□ -0.16
SRRM4A7MD48 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC14.08□□□□□ -0.16
SRRM4A7MD48 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.08□□□□□ -0.16
SRRM4A7MD48 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SRRM4A7MD48 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SRRM4A7MD48 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.08□□□□□ -0.16
SRRM4A7MD48 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
SRRM4A7MD48 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.08□□□□□ -0.16
SRRM4A7MD48 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.08□□□□□ -0.16
SRRM4A7MD48 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.08□□□□□ -0.16
SRRM4A7MD48 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.08□□□□□ -0.16
SRRM4A7MD48 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SRRM4A7MD48 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SRRM4A7MD48 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SRRM4A7MD48 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SRRM4A7MD48 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
SRRM4A7MD48 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SRRM4A7MD48 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SRRM4A7MD48 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SRRM4A7MD48 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SRRM4A7MD48 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
SRRM4A7MD48 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
SRRM4A7MD48 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.08□□□□□ -0.16
SRRM4A7MD48 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.08□□□□□ -0.16
SRRM4A7MD48 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SRRM4A7MD48 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
SRRM4A7MD48 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SRRM4A7MD48 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SRRM4A7MD48 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SRRM4A7MD48 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SRRM4A7MD48 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SRRM4A7MD48 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.07□□□□□ -0.16
SRRM4A7MD48 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SRRM4A7MD48 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SRRM4A7MD48 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SRRM4A7MD48 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.07□□□□□ -0.16
SRRM4A7MD48 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SRRM4A7MD48 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SRRM4A7MD48 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SRRM4A7MD48 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SRRM4A7MD48 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.07□□□□□ -0.16
SRRM4A7MD48 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SRRM4A7MD48 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.07□□□□□ -0.16
SRRM4A7MD48 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SRRM4A7MD48 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SRRM4A7MD48 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SRRM4A7MD48 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SRRM4A7MD48 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SRRM4A7MD48 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SRRM4A7MD48 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SRRM4A7MD48 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SRRM4A7MD48 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SRRM4A7MD48 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SRRM4A7MD48 CHCHD2P8-201ENST00000429873 447 ntBASIC14.07□□□□□ -0.16
SRRM4A7MD48 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SRRM4A7MD48 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.07□□□□□ -0.16
SRRM4A7MD48 AC122714.2-201ENST00000502787 707 ntBASIC14.07□□□□□ -0.16
SRRM4A7MD48 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.07□□□□□ -0.16
SRRM4A7MD48 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC14.07□□□□□ -0.16
SRRM4A7MD48 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SRRM4A7MD48 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
SRRM4A7MD48 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.07□□□□□ -0.16
SRRM4A7MD48 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SRRM4A7MD48 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.07□□□□□ -0.16
SRRM4A7MD48 AL121672.3-201ENST00000608644 468 ntBASIC14.07□□□□□ -0.16
SRRM4A7MD48 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SRRM4A7MD48 AC116407.4-201ENST00000623319 1061 ntBASIC14.07□□□□□ -0.16
SRRM4A7MD48 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SRRM4A7MD48 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SRRM4A7MD48 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.07□□□□□ -0.16
SRRM4A7MD48 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SRRM4A7MD48 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SRRM4A7MD48 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.07□□□□□ -0.16
SRRM4A7MD48 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SRRM4A7MD48 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SRRM4A7MD48 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SRRM4A7MD48 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SRRM4A7MD48 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SRRM4A7MD48 NKILA-202ENST00000614771 2598 ntBASIC14.07□□□□□ -0.16
SRRM4A7MD48 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SRRM4A7MD48 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SRRM4A7MD48 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SRRM4A7MD48 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
SRRM4A7MD48 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SRRM4A7MD48 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.07□□□□□ -0.16
SRRM4A7MD48 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SRRM4A7MD48 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.07□□□□□ -0.16
SRRM4A7MD48 AC011676.5-201ENST00000624864 2660 ntBASIC14.07□□□□□ -0.16
SRRM4A7MD48 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SRRM4A7MD48 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.06□□□□□ -0.16
SRRM4A7MD48 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRRM4A7MD48 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SRRM4A7MD48 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRRM4A7MD48 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.06□□□□□ -0.16
SRRM4A7MD48 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRRM4A7MD48 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRRM4A7MD48 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SRRM4A7MD48 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
SRRM4A7MD48 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.06□□□□□ -0.16
SRRM4A7MD48 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms