Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
YJEFN3A6XGL0 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
YJEFN3A6XGL0 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
YJEFN3A6XGL0 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
YJEFN3A6XGL0 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
YJEFN3A6XGL0 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
YJEFN3A6XGL0 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
YJEFN3A6XGL0 AC097637.2-201ENST00000624096 1997 ntBASIC18.21■□□□□ 0.5
YJEFN3A6XGL0 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
YJEFN3A6XGL0 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
YJEFN3A6XGL0 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
YJEFN3A6XGL0 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.2■□□□□ 0.5
YJEFN3A6XGL0 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.2■□□□□ 0.5
YJEFN3A6XGL0 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
YJEFN3A6XGL0 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
YJEFN3A6XGL0 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
YJEFN3A6XGL0 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.2■□□□□ 0.5
YJEFN3A6XGL0 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.2■□□□□ 0.5
YJEFN3A6XGL0 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.2■□□□□ 0.5
YJEFN3A6XGL0 AC012640.2-201ENST00000561606 901 ntBASIC18.2■□□□□ 0.5
YJEFN3A6XGL0 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.2■□□□□ 0.5
YJEFN3A6XGL0 MIR7706-201ENST00000613747 67 ntBASIC18.2■□□□□ 0.5
YJEFN3A6XGL0 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.2■□□□□ 0.5
YJEFN3A6XGL0 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.2■□□□□ 0.5
YJEFN3A6XGL0 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
YJEFN3A6XGL0 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
YJEFN3A6XGL0 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
YJEFN3A6XGL0 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
YJEFN3A6XGL0 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
YJEFN3A6XGL0 BCL2-203ENST00000589955 5011 ntBASIC18.2■□□□□ 0.5
YJEFN3A6XGL0 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
YJEFN3A6XGL0 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
YJEFN3A6XGL0 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
YJEFN3A6XGL0 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
YJEFN3A6XGL0 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
YJEFN3A6XGL0 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
YJEFN3A6XGL0 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
YJEFN3A6XGL0 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
YJEFN3A6XGL0 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
YJEFN3A6XGL0 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.19■□□□□ 0.5
YJEFN3A6XGL0 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.19■□□□□ 0.5
YJEFN3A6XGL0 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.19■□□□□ 0.5
YJEFN3A6XGL0 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.19■□□□□ 0.5
YJEFN3A6XGL0 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.19■□□□□ 0.5
YJEFN3A6XGL0 AP001005.1-201ENST00000571755 1248 ntBASIC18.19■□□□□ 0.5
YJEFN3A6XGL0 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
YJEFN3A6XGL0 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.19■□□□□ 0.5
YJEFN3A6XGL0 AL589182.2-201ENST00000619332 1049 ntBASIC18.19■□□□□ 0.5
YJEFN3A6XGL0 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
YJEFN3A6XGL0 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
YJEFN3A6XGL0 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.19■□□□□ 0.5
YJEFN3A6XGL0 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
YJEFN3A6XGL0 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
YJEFN3A6XGL0 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
YJEFN3A6XGL0 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
YJEFN3A6XGL0 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.18■□□□□ 0.5
YJEFN3A6XGL0 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.18■□□□□ 0.5
YJEFN3A6XGL0 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
YJEFN3A6XGL0 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
YJEFN3A6XGL0 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
YJEFN3A6XGL0 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
YJEFN3A6XGL0 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
YJEFN3A6XGL0 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
YJEFN3A6XGL0 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
YJEFN3A6XGL0 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.18■□□□□ 0.5
YJEFN3A6XGL0 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
YJEFN3A6XGL0 LAGE3P1-201ENST00000425356 484 ntBASIC18.18■□□□□ 0.5
YJEFN3A6XGL0 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.18■□□□□ 0.5
YJEFN3A6XGL0 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
YJEFN3A6XGL0 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.18■□□□□ 0.5
YJEFN3A6XGL0 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.18■□□□□ 0.5
YJEFN3A6XGL0 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
YJEFN3A6XGL0 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
YJEFN3A6XGL0 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
YJEFN3A6XGL0 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
YJEFN3A6XGL0 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
YJEFN3A6XGL0 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
YJEFN3A6XGL0 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.18■□□□□ 0.5
YJEFN3A6XGL0 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.18■□□□□ 0.5
YJEFN3A6XGL0 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
YJEFN3A6XGL0 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
YJEFN3A6XGL0 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
YJEFN3A6XGL0 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
YJEFN3A6XGL0 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
YJEFN3A6XGL0 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
YJEFN3A6XGL0 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
YJEFN3A6XGL0 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.17■□□□□ 0.5
YJEFN3A6XGL0 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
YJEFN3A6XGL0 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
YJEFN3A6XGL0 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
YJEFN3A6XGL0 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
YJEFN3A6XGL0 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
YJEFN3A6XGL0 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
YJEFN3A6XGL0 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
YJEFN3A6XGL0 LINC00982-205ENST00000420957 435 ntBASIC18.17■□□□□ 0.5
YJEFN3A6XGL0 AC079776.4-201ENST00000511039 504 ntBASIC18.17■□□□□ 0.5
YJEFN3A6XGL0 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.17■□□□□ 0.5
YJEFN3A6XGL0 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.17■□□□□ 0.5
YJEFN3A6XGL0 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
YJEFN3A6XGL0 AC139887.3-201ENST00000568585 713 ntBASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms