Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA11Q9Y5H2 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PCDHGA11Q9Y5H2 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17■□□□□ 0.31
PCDHGA11Q9Y5H2 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17■□□□□ 0.31
PCDHGA11Q9Y5H2 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17■□□□□ 0.31
PCDHGA11Q9Y5H2 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PCDHGA11Q9Y5H2 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA11Q9Y5H2 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA11Q9Y5H2 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA11Q9Y5H2 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA11Q9Y5H2 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHGA11Q9Y5H2 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PCDHGA11Q9Y5H2 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA11Q9Y5H2 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA11Q9Y5H2 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PCDHGA11Q9Y5H2 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PCDHGA11Q9Y5H2 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA11Q9Y5H2 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA11Q9Y5H2 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
PCDHGA11Q9Y5H2 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA11Q9Y5H2 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA11Q9Y5H2 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA11Q9Y5H2 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA11Q9Y5H2 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA11Q9Y5H2 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.99■□□□□ 0.31
PCDHGA11Q9Y5H2 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA11Q9Y5H2 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PCDHGA11Q9Y5H2 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA11Q9Y5H2 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.99■□□□□ 0.31
PCDHGA11Q9Y5H2 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDHGA11Q9Y5H2 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PCDHGA11Q9Y5H2 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA11Q9Y5H2 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDHGA11Q9Y5H2 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA11Q9Y5H2 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDHGA11Q9Y5H2 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PCDHGA11Q9Y5H2 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PCDHGA11Q9Y5H2 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.99■□□□□ 0.31
PCDHGA11Q9Y5H2 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHGA11Q9Y5H2 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA11Q9Y5H2 AC010460.3-201ENST00000511359 1579 ntBASIC16.98■□□□□ 0.31
PCDHGA11Q9Y5H2 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA11Q9Y5H2 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA11Q9Y5H2 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA11Q9Y5H2 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA11Q9Y5H2 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA11Q9Y5H2 AC125634.1-201ENST00000438758 1403 ntBASIC16.98■□□□□ 0.31
PCDHGA11Q9Y5H2 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA11Q9Y5H2 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA11Q9Y5H2 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA11Q9Y5H2 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA11Q9Y5H2 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA11Q9Y5H2 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
PCDHGA11Q9Y5H2 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA11Q9Y5H2 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDHGA11Q9Y5H2 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PCDHGA11Q9Y5H2 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA11Q9Y5H2 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
PCDHGA11Q9Y5H2 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA11Q9Y5H2 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDHGA11Q9Y5H2 CHCHD2P8-201ENST00000429873 447 ntBASIC16.98■□□□□ 0.31
PCDHGA11Q9Y5H2 AC246785.2-201ENST00000432512 513 ntBASIC16.98■□□□□ 0.31
PCDHGA11Q9Y5H2 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.98■□□□□ 0.31
PCDHGA11Q9Y5H2 AC002558.1-201ENST00000488906 803 ntBASIC16.98■□□□□ 0.31
PCDHGA11Q9Y5H2 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDHGA11Q9Y5H2 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.98■□□□□ 0.31
PCDHGA11Q9Y5H2 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA11Q9Y5H2 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDHGA11Q9Y5H2 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.98■□□□□ 0.31
PCDHGA11Q9Y5H2 AC087388.1-201ENST00000571370 1112 ntBASIC16.98■□□□□ 0.31
PCDHGA11Q9Y5H2 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PCDHGA11Q9Y5H2 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.98■□□□□ 0.31
PCDHGA11Q9Y5H2 AC116407.4-201ENST00000623319 1061 ntBASIC16.98■□□□□ 0.31
PCDHGA11Q9Y5H2 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDHGA11Q9Y5H2 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA11Q9Y5H2 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PCDHGA11Q9Y5H2 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDHGA11Q9Y5H2 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.98■□□□□ 0.31
PCDHGA11Q9Y5H2 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.98■□□□□ 0.31
PCDHGA11Q9Y5H2 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA11Q9Y5H2 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA11Q9Y5H2 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA11Q9Y5H2 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDHGA11Q9Y5H2 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA11Q9Y5H2 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDHGA11Q9Y5H2 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA11Q9Y5H2 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
PCDHGA11Q9Y5H2 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA11Q9Y5H2 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA11Q9Y5H2 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PCDHGA11Q9Y5H2 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDHGA11Q9Y5H2 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA11Q9Y5H2 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA11Q9Y5H2 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDHGA11Q9Y5H2 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDHGA11Q9Y5H2 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA11Q9Y5H2 VENTXP7-201ENST00000475503 772 ntBASIC16.97■□□□□ 0.31
PCDHGA11Q9Y5H2 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA11Q9Y5H2 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
PCDHGA11Q9Y5H2 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms