Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
PCDHGC3Q9UN70 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGC3Q9UN70 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHGC3Q9UN70 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGC3Q9UN70 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGC3Q9UN70 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGC3Q9UN70 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGC3Q9UN70 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGC3Q9UN70 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGC3Q9UN70 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGC3Q9UN70 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHGC3Q9UN70 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGC3Q9UN70 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGC3Q9UN70 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHGC3Q9UN70 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGC3Q9UN70 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGC3Q9UN70 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGC3Q9UN70 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PCDHGC3Q9UN70 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGC3Q9UN70 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGC3Q9UN70 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGC3Q9UN70 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PCDHGC3Q9UN70 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHGC3Q9UN70 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGC3Q9UN70 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGC3Q9UN70 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGC3Q9UN70 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.42■□□□□ 0.54
PCDHGC3Q9UN70 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
PCDHGC3Q9UN70 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGC3Q9UN70 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGC3Q9UN70 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGC3Q9UN70 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
PCDHGC3Q9UN70 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
PCDHGC3Q9UN70 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
PCDHGC3Q9UN70 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
PCDHGC3Q9UN70 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PCDHGC3Q9UN70 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHGC3Q9UN70 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
PCDHGC3Q9UN70 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PCDHGC3Q9UN70 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGC3Q9UN70 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGC3Q9UN70 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGC3Q9UN70 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGC3Q9UN70 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGC3Q9UN70 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGC3Q9UN70 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGC3Q9UN70 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGC3Q9UN70 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGC3Q9UN70 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHGC3Q9UN70 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDHGC3Q9UN70 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGC3Q9UN70 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGC3Q9UN70 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGC3Q9UN70 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDHGC3Q9UN70 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGC3Q9UN70 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGC3Q9UN70 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGC3Q9UN70 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
PCDHGC3Q9UN70 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGC3Q9UN70 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGC3Q9UN70 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGC3Q9UN70 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.41■□□□□ 0.54
PCDHGC3Q9UN70 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PCDHGC3Q9UN70 KRT18P56-201ENST00000507275 550 ntBASIC18.41■□□□□ 0.54
PCDHGC3Q9UN70 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.41■□□□□ 0.54
PCDHGC3Q9UN70 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.41■□□□□ 0.54
PCDHGC3Q9UN70 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGC3Q9UN70 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHGC3Q9UN70 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDHGC3Q9UN70 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGC3Q9UN70 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGC3Q9UN70 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGC3Q9UN70 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGC3Q9UN70 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGC3Q9UN70 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGC3Q9UN70 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGC3Q9UN70 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGC3Q9UN70 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHGC3Q9UN70 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGC3Q9UN70 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGC3Q9UN70 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDHGC3Q9UN70 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
PCDHGC3Q9UN70 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGC3Q9UN70 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGC3Q9UN70 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
PCDHGC3Q9UN70 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGC3Q9UN70 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
PCDHGC3Q9UN70 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGC3Q9UN70 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHGC3Q9UN70 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGC3Q9UN70 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.4■□□□□ 0.54
PCDHGC3Q9UN70 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHGC3Q9UN70 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.4■□□□□ 0.54
PCDHGC3Q9UN70 PRYP5-201ENST00000451909 266 ntBASIC18.4■□□□□ 0.54
PCDHGC3Q9UN70 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.4■□□□□ 0.54
PCDHGC3Q9UN70 REXO1L6P-202ENST00000619970 1078 ntBASIC18.4■□□□□ 0.54
PCDHGC3Q9UN70 AC012313.10-201ENST00000623509 926 ntBASIC18.4■□□□□ 0.54
PCDHGC3Q9UN70 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDHGC3Q9UN70 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PCDHGC3Q9UN70 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms