Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HDAC6Q9UBN7 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HDAC6Q9UBN7 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.77■□□□□ 0.76
HDAC6Q9UBN7 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
HDAC6Q9UBN7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
HDAC6Q9UBN7 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.75
HDAC6Q9UBN7 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
HDAC6Q9UBN7 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
HDAC6Q9UBN7 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HDAC6Q9UBN7 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HDAC6Q9UBN7 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HDAC6Q9UBN7 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
HDAC6Q9UBN7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HDAC6Q9UBN7 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HDAC6Q9UBN7 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HDAC6Q9UBN7 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.76■□□□□ 0.75
HDAC6Q9UBN7 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.76■□□□□ 0.75
HDAC6Q9UBN7 PMPCAP1-201ENST00000508114 1576 ntBASIC19.76■□□□□ 0.75
HDAC6Q9UBN7 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HDAC6Q9UBN7 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HDAC6Q9UBN7 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.76■□□□□ 0.75
HDAC6Q9UBN7 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.76■□□□□ 0.75
HDAC6Q9UBN7 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.76■□□□□ 0.75
HDAC6Q9UBN7 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.76■□□□□ 0.75
HDAC6Q9UBN7 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.76■□□□□ 0.75
HDAC6Q9UBN7 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HDAC6Q9UBN7 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HDAC6Q9UBN7 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.76■□□□□ 0.75
HDAC6Q9UBN7 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HDAC6Q9UBN7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
HDAC6Q9UBN7 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HDAC6Q9UBN7 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HDAC6Q9UBN7 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HDAC6Q9UBN7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HDAC6Q9UBN7 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
HDAC6Q9UBN7 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HDAC6Q9UBN7 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HDAC6Q9UBN7 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
HDAC6Q9UBN7 AC079776.2-201ENST00000641154 1609 ntBASIC19.76■□□□□ 0.75
HDAC6Q9UBN7 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HDAC6Q9UBN7 PCDHA12-202ENST00000613593 2588 ntBASIC19.76■□□□□ 0.75
HDAC6Q9UBN7 AC009053.2-201ENST00000563701 2365 ntBASIC19.76■□□□□ 0.75
HDAC6Q9UBN7 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HDAC6Q9UBN7 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
HDAC6Q9UBN7 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HDAC6Q9UBN7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HDAC6Q9UBN7 PHGDH-209ENST00000641074 1780 ntBASIC19.75■□□□□ 0.75
HDAC6Q9UBN7 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
HDAC6Q9UBN7 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HDAC6Q9UBN7 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.75■□□□□ 0.75
HDAC6Q9UBN7 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.75■□□□□ 0.75
HDAC6Q9UBN7 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HDAC6Q9UBN7 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HDAC6Q9UBN7 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HDAC6Q9UBN7 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.75■□□□□ 0.75
HDAC6Q9UBN7 KRT8P47-201ENST00000604727 1398 ntBASIC19.75■□□□□ 0.75
HDAC6Q9UBN7 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HDAC6Q9UBN7 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HDAC6Q9UBN7 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HDAC6Q9UBN7 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HDAC6Q9UBN7 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.75■□□□□ 0.75
HDAC6Q9UBN7 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.75■□□□□ 0.75
HDAC6Q9UBN7 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
HDAC6Q9UBN7 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HDAC6Q9UBN7 UNC93B6-202ENST00000528242 690 ntBASIC19.75■□□□□ 0.75
HDAC6Q9UBN7 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HDAC6Q9UBN7 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.75■□□□□ 0.75
HDAC6Q9UBN7 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HDAC6Q9UBN7 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
HDAC6Q9UBN7 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.75■□□□□ 0.75
HDAC6Q9UBN7 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
HDAC6Q9UBN7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HDAC6Q9UBN7 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.75■□□□□ 0.75
HDAC6Q9UBN7 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
HDAC6Q9UBN7 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.75■□□□□ 0.75
HDAC6Q9UBN7 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
HDAC6Q9UBN7 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
HDAC6Q9UBN7 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HDAC6Q9UBN7 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HDAC6Q9UBN7 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.75■□□□□ 0.75
HDAC6Q9UBN7 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HDAC6Q9UBN7 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.75■□□□□ 0.75
HDAC6Q9UBN7 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HDAC6Q9UBN7 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HDAC6Q9UBN7 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.74■□□□□ 0.75
HDAC6Q9UBN7 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
HDAC6Q9UBN7 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.74■□□□□ 0.75
HDAC6Q9UBN7 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
HDAC6Q9UBN7 AC080080.1-201ENST00000625121 2420 ntBASIC19.74■□□□□ 0.75
HDAC6Q9UBN7 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HDAC6Q9UBN7 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
HDAC6Q9UBN7 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HDAC6Q9UBN7 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HDAC6Q9UBN7 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HDAC6Q9UBN7 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.74■□□□□ 0.75
HDAC6Q9UBN7 LAGE3P1-201ENST00000425356 484 ntBASIC19.74■□□□□ 0.75
HDAC6Q9UBN7 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.74■□□□□ 0.75
HDAC6Q9UBN7 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.74■□□□□ 0.75
HDAC6Q9UBN7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.74■□□□□ 0.75
HDAC6Q9UBN7 AC004817.3-201ENST00000602957 2129 ntBASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms