Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL20A1Q9P218 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL20A1Q9P218 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.69■□□□□ 0.74
COL20A1Q9P218 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
COL20A1Q9P218 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
COL20A1Q9P218 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL20A1Q9P218 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL20A1Q9P218 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
COL20A1Q9P218 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
COL20A1Q9P218 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.69■□□□□ 0.74
COL20A1Q9P218 MRPL20P1-201ENST00000400819 433 ntBASIC19.69■□□□□ 0.74
COL20A1Q9P218 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.69■□□□□ 0.74
COL20A1Q9P218 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.69■□□□□ 0.74
COL20A1Q9P218 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.69■□□□□ 0.74
COL20A1Q9P218 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.69■□□□□ 0.74
COL20A1Q9P218 AC002347.1-201ENST00000569543 541 ntBASIC19.69■□□□□ 0.74
COL20A1Q9P218 AC010654.1-201ENST00000615722 808 ntBASIC19.69■□□□□ 0.74
COL20A1Q9P218 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL20A1Q9P218 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL20A1Q9P218 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL20A1Q9P218 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL20A1Q9P218 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL20A1Q9P218 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL20A1Q9P218 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL20A1Q9P218 AC133963.1-201ENST00000504166 1679 ntBASIC19.68■□□□□ 0.74
COL20A1Q9P218 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL20A1Q9P218 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.68■□□□□ 0.74
COL20A1Q9P218 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
COL20A1Q9P218 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
COL20A1Q9P218 PI4KAP1-204ENST00000612579 1703 ntBASIC19.68■□□□□ 0.74
COL20A1Q9P218 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL20A1Q9P218 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.68■□□□□ 0.74
COL20A1Q9P218 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL20A1Q9P218 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
COL20A1Q9P218 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL20A1Q9P218 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL20A1Q9P218 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.68■□□□□ 0.74
COL20A1Q9P218 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.68■□□□□ 0.74
COL20A1Q9P218 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.68■□□□□ 0.74
COL20A1Q9P218 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.68■□□□□ 0.74
COL20A1Q9P218 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.68■□□□□ 0.74
COL20A1Q9P218 AC010507.1-201ENST00000633895 436 ntBASIC19.68■□□□□ 0.74
COL20A1Q9P218 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL20A1Q9P218 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL20A1Q9P218 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL20A1Q9P218 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL20A1Q9P218 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL20A1Q9P218 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
COL20A1Q9P218 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.68■□□□□ 0.74
COL20A1Q9P218 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL20A1Q9P218 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL20A1Q9P218 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
COL20A1Q9P218 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL20A1Q9P218 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
COL20A1Q9P218 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL20A1Q9P218 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL20A1Q9P218 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.67■□□□□ 0.74
COL20A1Q9P218 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.67■□□□□ 0.74
COL20A1Q9P218 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.67■□□□□ 0.74
COL20A1Q9P218 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.67■□□□□ 0.74
COL20A1Q9P218 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.67■□□□□ 0.74
COL20A1Q9P218 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.67■□□□□ 0.74
COL20A1Q9P218 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.67■□□□□ 0.74
COL20A1Q9P218 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.67■□□□□ 0.74
COL20A1Q9P218 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.67■□□□□ 0.74
COL20A1Q9P218 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.67■□□□□ 0.74
COL20A1Q9P218 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
COL20A1Q9P218 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL20A1Q9P218 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL20A1Q9P218 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL20A1Q9P218 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL20A1Q9P218 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL20A1Q9P218 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL20A1Q9P218 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.67■□□□□ 0.74
COL20A1Q9P218 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL20A1Q9P218 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.67■□□□□ 0.74
COL20A1Q9P218 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL20A1Q9P218 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL20A1Q9P218 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL20A1Q9P218 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
COL20A1Q9P218 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
COL20A1Q9P218 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL20A1Q9P218 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.66■□□□□ 0.74
COL20A1Q9P218 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.66■□□□□ 0.74
COL20A1Q9P218 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
COL20A1Q9P218 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL20A1Q9P218 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL20A1Q9P218 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL20A1Q9P218 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL20A1Q9P218 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL20A1Q9P218 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
COL20A1Q9P218 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL20A1Q9P218 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL20A1Q9P218 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.66■□□□□ 0.74
COL20A1Q9P218 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL20A1Q9P218 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL20A1Q9P218 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL20A1Q9P218 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.65■□□□□ 0.74
COL20A1Q9P218 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL20A1Q9P218 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms