Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
LIN7CQ9NUP9 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
LIN7CQ9NUP9 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LIN7CQ9NUP9 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LIN7CQ9NUP9 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LIN7CQ9NUP9 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LIN7CQ9NUP9 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LIN7CQ9NUP9 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
LIN7CQ9NUP9 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.58□□□□□ -0.08
LIN7CQ9NUP9 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
LIN7CQ9NUP9 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LIN7CQ9NUP9 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LIN7CQ9NUP9 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LIN7CQ9NUP9 LINC01311-201ENST00000565162 1445 ntBASIC14.58□□□□□ -0.08
LIN7CQ9NUP9 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 MED29-202ENST00000594368 1471 ntTSL 2 BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 TPR-209ENST00000613151 2478 ntTSL 5 BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 HBZP1-201ENST00000354915 429 ntBASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 AC124067.4-201ENST00000519691 2379 ntBASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 AL391807.1-203ENST00000604392 2365 ntBASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 AC011676.5-201ENST00000624864 2660 ntBASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LIN7CQ9NUP9 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
LIN7CQ9NUP9 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
LIN7CQ9NUP9 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LIN7CQ9NUP9 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LIN7CQ9NUP9 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
LIN7CQ9NUP9 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LIN7CQ9NUP9 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LIN7CQ9NUP9 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LIN7CQ9NUP9 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.56□□□□□ -0.08
LIN7CQ9NUP9 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LIN7CQ9NUP9 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LIN7CQ9NUP9 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LIN7CQ9NUP9 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LIN7CQ9NUP9 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.56□□□□□ -0.08
LIN7CQ9NUP9 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LIN7CQ9NUP9 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LIN7CQ9NUP9 AC007326.2-201ENST00000624224 7579 ntBASIC14.56□□□□□ -0.08
LIN7CQ9NUP9 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LIN7CQ9NUP9 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC14.56□□□□□ -0.08
LIN7CQ9NUP9 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LIN7CQ9NUP9 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LIN7CQ9NUP9 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
LIN7CQ9NUP9 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LIN7CQ9NUP9 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
LIN7CQ9NUP9 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LIN7CQ9NUP9 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
LIN7CQ9NUP9 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC14.56□□□□□ -0.08
LIN7CQ9NUP9 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC14.56□□□□□ -0.08
LIN7CQ9NUP9 HLA-F-220ENST00000434407 884 ntBASIC14.56□□□□□ -0.08
LIN7CQ9NUP9 KRT18P65-201ENST00000439811 1286 ntBASIC14.56□□□□□ -0.08
LIN7CQ9NUP9 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LIN7CQ9NUP9 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC14.56□□□□□ -0.08
LIN7CQ9NUP9 ZNF444P1-201ENST00000559497 298 ntBASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms