Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 AL049757.1-201ENST00000616842 1596 ntBASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.55■□□□□ 0.24
SLC52A3Q9NQ40 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC52A3Q9NQ40 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.54■□□□□ 0.24
SLC52A3Q9NQ40 AL139384.1-201ENST00000612143 3047 ntBASIC16.54■□□□□ 0.24
SLC52A3Q9NQ40 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SLC52A3Q9NQ40 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SLC52A3Q9NQ40 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC52A3Q9NQ40 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
SLC52A3Q9NQ40 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC52A3Q9NQ40 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC52A3Q9NQ40 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
SLC52A3Q9NQ40 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SLC52A3Q9NQ40 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC52A3Q9NQ40 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SLC52A3Q9NQ40 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC52A3Q9NQ40 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC52A3Q9NQ40 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC52A3Q9NQ40 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.54■□□□□ 0.24
SLC52A3Q9NQ40 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.54■□□□□ 0.24
SLC52A3Q9NQ40 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SLC52A3Q9NQ40 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.54■□□□□ 0.24
SLC52A3Q9NQ40 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
SLC52A3Q9NQ40 ZNF444P1-201ENST00000559497 298 ntBASIC16.54■□□□□ 0.24
SLC52A3Q9NQ40 RNF126P1-202ENST00000569893 925 ntBASIC16.54■□□□□ 0.24
SLC52A3Q9NQ40 AC109462.3-201ENST00000573934 613 ntBASIC16.54■□□□□ 0.24
SLC52A3Q9NQ40 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.54■□□□□ 0.24
SLC52A3Q9NQ40 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.54■□□□□ 0.24
SLC52A3Q9NQ40 HYMAI.1-201ENST00000620949 238 ntBASIC16.54■□□□□ 0.24
SLC52A3Q9NQ40 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SLC52A3Q9NQ40 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC52A3Q9NQ40 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SLC52A3Q9NQ40 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SLC52A3Q9NQ40 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC52A3Q9NQ40 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC52A3Q9NQ40 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC52A3Q9NQ40 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC52A3Q9NQ40 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.54■□□□□ 0.24
SLC52A3Q9NQ40 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SLC52A3Q9NQ40 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
SLC52A3Q9NQ40 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC52A3Q9NQ40 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
SLC52A3Q9NQ40 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC52A3Q9NQ40 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.53■□□□□ 0.24
SLC52A3Q9NQ40 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SLC52A3Q9NQ40 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.53■□□□□ 0.24
SLC52A3Q9NQ40 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC52A3Q9NQ40 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SLC52A3Q9NQ40 EGFEM1P-202ENST00000431685 1563 ntBASIC16.53■□□□□ 0.24
SLC52A3Q9NQ40 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SLC52A3Q9NQ40 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC52A3Q9NQ40 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.53■□□□□ 0.24
SLC52A3Q9NQ40 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.53■□□□□ 0.24
SLC52A3Q9NQ40 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC52A3Q9NQ40 KRT18P38-201ENST00000449496 1282 ntBASIC16.53■□□□□ 0.24
SLC52A3Q9NQ40 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.53■□□□□ 0.24
SLC52A3Q9NQ40 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.53■□□□□ 0.24
SLC52A3Q9NQ40 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SLC52A3Q9NQ40 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SLC52A3Q9NQ40 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC52A3Q9NQ40 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC52A3Q9NQ40 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.53■□□□□ 0.24
SLC52A3Q9NQ40 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC52A3Q9NQ40 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.53■□□□□ 0.24
SLC52A3Q9NQ40 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.53■□□□□ 0.24
SLC52A3Q9NQ40 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SLC52A3Q9NQ40 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC52A3Q9NQ40 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC52A3Q9NQ40 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SLC52A3Q9NQ40 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SLC52A3Q9NQ40 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.52■□□□□ 0.24
SLC52A3Q9NQ40 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC52A3Q9NQ40 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SLC52A3Q9NQ40 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.52■□□□□ 0.24
SLC52A3Q9NQ40 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC52A3Q9NQ40 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SLC52A3Q9NQ40 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC52A3Q9NQ40 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.52■□□□□ 0.24
SLC52A3Q9NQ40 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.52■□□□□ 0.24
SLC52A3Q9NQ40 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
SLC52A3Q9NQ40 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SLC52A3Q9NQ40 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.52■□□□□ 0.24
SLC52A3Q9NQ40 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.52■□□□□ 0.24
SLC52A3Q9NQ40 YBX1P2-201ENST00000489612 999 ntBASIC16.52■□□□□ 0.24
SLC52A3Q9NQ40 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.52■□□□□ 0.24
SLC52A3Q9NQ40 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.52■□□□□ 0.24
SLC52A3Q9NQ40 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.52■□□□□ 0.24
SLC52A3Q9NQ40 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.52■□□□□ 0.24
SLC52A3Q9NQ40 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms