Protein–RNA interactions for Protein: Q9NP91

SLC6A20, Sodium- and chloride-dependent transporter XTRP3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20Q9NP91 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC6A20Q9NP91 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC6A20Q9NP91 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC6A20Q9NP91 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC6A20Q9NP91 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SLC6A20Q9NP91 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC6A20Q9NP91 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC6A20Q9NP91 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC6A20Q9NP91 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC6A20Q9NP91 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SLC6A20Q9NP91 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC6A20Q9NP91 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.79■□□□□ 0.28
SLC6A20Q9NP91 AC004817.3-201ENST00000602957 2129 ntBASIC16.79■□□□□ 0.28
SLC6A20Q9NP91 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC6A20Q9NP91 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC6A20Q9NP91 PCDHB18P-201ENST00000524813 2368 ntBASIC16.79■□□□□ 0.28
SLC6A20Q9NP91 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC6A20Q9NP91 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC6A20Q9NP91 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SLC6A20Q9NP91 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC6A20Q9NP91 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SLC6A20Q9NP91 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC6A20Q9NP91 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.79■□□□□ 0.28
SLC6A20Q9NP91 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.79■□□□□ 0.28
SLC6A20Q9NP91 AL020989.1-201ENST00000422979 469 ntBASIC16.79■□□□□ 0.28
SLC6A20Q9NP91 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC6A20Q9NP91 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
SLC6A20Q9NP91 AP000347.1-202ENST00000435868 847 ntBASIC16.79■□□□□ 0.28
SLC6A20Q9NP91 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.79■□□□□ 0.28
SLC6A20Q9NP91 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC6A20Q9NP91 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.79■□□□□ 0.28
SLC6A20Q9NP91 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SLC6A20Q9NP91 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC6A20Q9NP91 NKAPP1-205ENST00000585790 367 ntBASIC16.79■□□□□ 0.28
SLC6A20Q9NP91 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.79■□□□□ 0.28
SLC6A20Q9NP91 AL139288.1-201ENST00000623748 933 ntBASIC16.79■□□□□ 0.28
SLC6A20Q9NP91 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC6A20Q9NP91 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC6A20Q9NP91 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC6A20Q9NP91 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC6A20Q9NP91 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SLC6A20Q9NP91 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC6A20Q9NP91 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SLC6A20Q9NP91 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC6A20Q9NP91 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC6A20Q9NP91 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC6A20Q9NP91 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC6A20Q9NP91 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC6A20Q9NP91 AC046185.3-201ENST00000623228 1824 ntBASIC16.78■□□□□ 0.28
SLC6A20Q9NP91 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SLC6A20Q9NP91 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC6A20Q9NP91 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC6A20Q9NP91 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
SLC6A20Q9NP91 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC6A20Q9NP91 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.78■□□□□ 0.28
SLC6A20Q9NP91 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.78■□□□□ 0.28
SLC6A20Q9NP91 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SLC6A20Q9NP91 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.78■□□□□ 0.28
SLC6A20Q9NP91 AC079776.4-201ENST00000511039 504 ntBASIC16.78■□□□□ 0.28
SLC6A20Q9NP91 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC6A20Q9NP91 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC6A20Q9NP91 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
SLC6A20Q9NP91 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC6A20Q9NP91 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC6A20Q9NP91 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SLC6A20Q9NP91 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC6A20Q9NP91 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC6A20Q9NP91 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC6A20Q9NP91 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC6A20Q9NP91 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC6A20Q9NP91 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC6A20Q9NP91 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.77■□□□□ 0.28
SLC6A20Q9NP91 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC6A20Q9NP91 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC6A20Q9NP91 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.77■□□□□ 0.28
SLC6A20Q9NP91 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC6A20Q9NP91 AL138688.1-201ENST00000624851 1594 ntBASIC16.77■□□□□ 0.28
SLC6A20Q9NP91 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC6A20Q9NP91 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
SLC6A20Q9NP91 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
SLC6A20Q9NP91 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
SLC6A20Q9NP91 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.77■□□□□ 0.28
SLC6A20Q9NP91 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
SLC6A20Q9NP91 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.77■□□□□ 0.28
SLC6A20Q9NP91 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC6A20Q9NP91 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC6A20Q9NP91 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC6A20Q9NP91 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC6A20Q9NP91 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC6A20Q9NP91 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC6A20Q9NP91 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC6A20Q9NP91 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC6A20Q9NP91 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.77■□□□□ 0.28
SLC6A20Q9NP91 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.77■□□□□ 0.28
SLC6A20Q9NP91 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.77■□□□□ 0.28
SLC6A20Q9NP91 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.77■□□□□ 0.28
SLC6A20Q9NP91 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
SLC6A20Q9NP91 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SLC6A20Q9NP91 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SLC6A20Q9NP91 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms