Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN3Q9H347 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.23■□□□□ 0.19
UBQLN3Q9H347 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN3Q9H347 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN3Q9H347 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.23■□□□□ 0.19
UBQLN3Q9H347 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
UBQLN3Q9H347 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.23■□□□□ 0.19
UBQLN3Q9H347 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN3Q9H347 FAAHP1-202ENST00000446499 1238 ntBASIC16.23■□□□□ 0.19
UBQLN3Q9H347 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN3Q9H347 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.23■□□□□ 0.19
UBQLN3Q9H347 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN3Q9H347 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN3Q9H347 LINC01711-201ENST00000598340 967 ntBASIC16.23■□□□□ 0.19
UBQLN3Q9H347 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.23■□□□□ 0.19
UBQLN3Q9H347 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.23■□□□□ 0.19
UBQLN3Q9H347 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.23■□□□□ 0.19
UBQLN3Q9H347 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN3Q9H347 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
UBQLN3Q9H347 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN3Q9H347 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN3Q9H347 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN3Q9H347 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN3Q9H347 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN3Q9H347 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.23■□□□□ 0.19
UBQLN3Q9H347 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN3Q9H347 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.23■□□□□ 0.19
UBQLN3Q9H347 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN3Q9H347 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN3Q9H347 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN3Q9H347 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.22■□□□□ 0.19
UBQLN3Q9H347 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN3Q9H347 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.22■□□□□ 0.19
UBQLN3Q9H347 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN3Q9H347 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN3Q9H347 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.22■□□□□ 0.19
UBQLN3Q9H347 AC097374.2-201ENST00000618617 1306 ntBASIC16.22■□□□□ 0.19
UBQLN3Q9H347 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
UBQLN3Q9H347 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN3Q9H347 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.22■□□□□ 0.19
UBQLN3Q9H347 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN3Q9H347 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN3Q9H347 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN3Q9H347 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN3Q9H347 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN3Q9H347 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
UBQLN3Q9H347 AP001094.4-201ENST00000579008 2176 ntBASIC16.22■□□□□ 0.19
UBQLN3Q9H347 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
UBQLN3Q9H347 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN3Q9H347 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN3Q9H347 AC004870.1-201ENST00000315132 882 ntBASIC16.22■□□□□ 0.19
UBQLN3Q9H347 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.22■□□□□ 0.19
UBQLN3Q9H347 RCN1P2-201ENST00000398357 915 ntBASIC16.22■□□□□ 0.19
UBQLN3Q9H347 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.22■□□□□ 0.19
UBQLN3Q9H347 EMBP1-201ENST00000458200 901 ntBASIC16.22■□□□□ 0.19
UBQLN3Q9H347 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.22■□□□□ 0.19
UBQLN3Q9H347 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.22■□□□□ 0.19
UBQLN3Q9H347 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.22■□□□□ 0.19
UBQLN3Q9H347 MIR5100-201ENST00000579544 119 ntBASIC16.22■□□□□ 0.19
UBQLN3Q9H347 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
UBQLN3Q9H347 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN3Q9H347 AC011467.2-201ENST00000598425 242 ntBASIC16.22■□□□□ 0.19
UBQLN3Q9H347 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.22■□□□□ 0.19
UBQLN3Q9H347 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN3Q9H347 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN3Q9H347 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.22■□□□□ 0.19
UBQLN3Q9H347 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN3Q9H347 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN3Q9H347 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.22■□□□□ 0.19
UBQLN3Q9H347 KRT8P47-201ENST00000604727 1398 ntBASIC16.22■□□□□ 0.19
UBQLN3Q9H347 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN3Q9H347 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN3Q9H347 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.22■□□□□ 0.19
UBQLN3Q9H347 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN3Q9H347 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.22■□□□□ 0.19
UBQLN3Q9H347 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.22■□□□□ 0.19
UBQLN3Q9H347 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBQLN3Q9H347 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBQLN3Q9H347 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.21■□□□□ 0.19
UBQLN3Q9H347 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
UBQLN3Q9H347 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.21■□□□□ 0.19
UBQLN3Q9H347 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
UBQLN3Q9H347 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBQLN3Q9H347 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.21■□□□□ 0.19
UBQLN3Q9H347 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.21■□□□□ 0.19
UBQLN3Q9H347 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.21■□□□□ 0.19
UBQLN3Q9H347 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBQLN3Q9H347 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
UBQLN3Q9H347 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBQLN3Q9H347 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
UBQLN3Q9H347 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBQLN3Q9H347 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBQLN3Q9H347 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
UBQLN3Q9H347 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
UBQLN3Q9H347 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.21■□□□□ 0.19
UBQLN3Q9H347 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBQLN3Q9H347 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
UBQLN3Q9H347 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.21■□□□□ 0.19
UBQLN3Q9H347 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
UBQLN3Q9H347 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms