Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UPF3BQ9BZI7 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UPF3BQ9BZI7 AL031133.1-201ENST00000406807 723 ntBASIC20.88■□□□□ 0.93
UPF3BQ9BZI7 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.88■□□□□ 0.93
UPF3BQ9BZI7 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
UPF3BQ9BZI7 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.88■□□□□ 0.93
UPF3BQ9BZI7 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.88■□□□□ 0.93
UPF3BQ9BZI7 GUSBP12-201ENST00000513727 720 ntBASIC20.88■□□□□ 0.93
UPF3BQ9BZI7 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.88■□□□□ 0.93
UPF3BQ9BZI7 AL136038.3-201ENST00000561909 1096 ntBASIC20.88■□□□□ 0.93
UPF3BQ9BZI7 AL139327.4-201ENST00000612362 153 ntBASIC20.88■□□□□ 0.93
UPF3BQ9BZI7 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.88■□□□□ 0.93
UPF3BQ9BZI7 AC060834.1-201ENST00000443027 2032 ntBASIC20.88■□□□□ 0.93
UPF3BQ9BZI7 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
UPF3BQ9BZI7 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
UPF3BQ9BZI7 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20.88■□□□□ 0.93
UPF3BQ9BZI7 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UPF3BQ9BZI7 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
UPF3BQ9BZI7 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.87■□□□□ 0.93
UPF3BQ9BZI7 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UPF3BQ9BZI7 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
UPF3BQ9BZI7 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
UPF3BQ9BZI7 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
UPF3BQ9BZI7 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UPF3BQ9BZI7 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC20.87■□□□□ 0.93
UPF3BQ9BZI7 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.87■□□□□ 0.93
UPF3BQ9BZI7 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UPF3BQ9BZI7 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
UPF3BQ9BZI7 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.87■□□□□ 0.93
UPF3BQ9BZI7 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.87■□□□□ 0.93
UPF3BQ9BZI7 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.87■□□□□ 0.93
UPF3BQ9BZI7 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.87■□□□□ 0.93
UPF3BQ9BZI7 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.87■□□□□ 0.93
UPF3BQ9BZI7 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.87■□□□□ 0.93
UPF3BQ9BZI7 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.87■□□□□ 0.93
UPF3BQ9BZI7 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
UPF3BQ9BZI7 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.87■□□□□ 0.93
UPF3BQ9BZI7 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
UPF3BQ9BZI7 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
UPF3BQ9BZI7 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
UPF3BQ9BZI7 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
UPF3BQ9BZI7 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UPF3BQ9BZI7 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UPF3BQ9BZI7 OR6D1P-202ENST00000641007 5290 ntBASIC20.87■□□□□ 0.93
UPF3BQ9BZI7 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.87■□□□□ 0.93
UPF3BQ9BZI7 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UPF3BQ9BZI7 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UPF3BQ9BZI7 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UPF3BQ9BZI7 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UPF3BQ9BZI7 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.86■□□□□ 0.93
UPF3BQ9BZI7 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
UPF3BQ9BZI7 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UPF3BQ9BZI7 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
UPF3BQ9BZI7 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.86■□□□□ 0.93
UPF3BQ9BZI7 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.86■□□□□ 0.93
UPF3BQ9BZI7 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
UPF3BQ9BZI7 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
UPF3BQ9BZI7 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UPF3BQ9BZI7 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UPF3BQ9BZI7 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
UPF3BQ9BZI7 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
UPF3BQ9BZI7 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
UPF3BQ9BZI7 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.86■□□□□ 0.93
UPF3BQ9BZI7 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.86■□□□□ 0.93
UPF3BQ9BZI7 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
UPF3BQ9BZI7 AC091607.1-201ENST00000490318 1060 ntBASIC20.86■□□□□ 0.93
UPF3BQ9BZI7 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
UPF3BQ9BZI7 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
UPF3BQ9BZI7 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.86■□□□□ 0.93
UPF3BQ9BZI7 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.86■□□□□ 0.93
UPF3BQ9BZI7 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.86■□□□□ 0.93
UPF3BQ9BZI7 AC019129.2-201ENST00000609837 1235 ntBASIC20.86■□□□□ 0.93
UPF3BQ9BZI7 AL353801.3-201ENST00000609898 542 ntBASIC20.86■□□□□ 0.93
UPF3BQ9BZI7 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.86■□□□□ 0.93
UPF3BQ9BZI7 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.86■□□□□ 0.93
UPF3BQ9BZI7 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
UPF3BQ9BZI7 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UPF3BQ9BZI7 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
UPF3BQ9BZI7 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UPF3BQ9BZI7 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
UPF3BQ9BZI7 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
UPF3BQ9BZI7 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UPF3BQ9BZI7 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UPF3BQ9BZI7 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
UPF3BQ9BZI7 AC125634.1-201ENST00000438758 1403 ntBASIC20.86■□□□□ 0.93
UPF3BQ9BZI7 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC20.86■□□□□ 0.93
UPF3BQ9BZI7 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
UPF3BQ9BZI7 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
UPF3BQ9BZI7 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC20.85■□□□□ 0.93
UPF3BQ9BZI7 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
UPF3BQ9BZI7 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
UPF3BQ9BZI7 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UPF3BQ9BZI7 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC20.85■□□□□ 0.93
UPF3BQ9BZI7 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC20.85■□□□□ 0.93
UPF3BQ9BZI7 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UPF3BQ9BZI7 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.85■□□□□ 0.93
UPF3BQ9BZI7 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.85■□□□□ 0.93
UPF3BQ9BZI7 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
UPF3BQ9BZI7 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
UPF3BQ9BZI7 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms